Prunus persica (peach): 18790721
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Entry
18790721 CDS
T03092
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
pper
Prunus persica (peach)
Pathway
pper03410
Base excision repair
pper03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
18790721
03450 Non-homologous end-joining
18790721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pper03400
]
18790721
Enzymes [BR:
pper01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
18790721
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
18790721
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
18790721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
Cdd1
HHH_5
NTP_transf_2
PTCB-BRCT
IMS_HHH_1
BRCT_2
Motif
Other DBs
NCBI-GeneID:
18790721
NCBI-ProteinID:
XP_007226258
UniProt:
M5XMY2
LinkDB
All DBs
Position
G1:complement(26908015..26912700)
Genome browser
AA seq
501 aa
AA seq
DB search
MAPKTTRNQSPPSDPQGMFAGLVVFLVEKRVQSRRLQIWKQKLVQMGATIEDSLTKRVTH
ILAMDPEALLQQLGSERLAHFKGTVVVYQWLEDSLSSGEKVSEDMYHLKLEADKSSNDYI
SSDDEPPKPKKLRSSSPDDLAHTSIPKTPESPNKDQITALQSAVPYNPPDLNKNITQIFG
KLINIYRALGDDRRSFSYYKAVPVIEKLPFKIQSVDQVKDLPNIGKSMQDHIQEIVTTGK
LSKLEHFETDEKVRTLALFEEIWGVGPATALKLYEKGHRTLDDLKNEDSLTNSQKLGLRY
YDDIKQRIPRHEAEEMEHLLQKVGENVLPGVVIVCGGSYRRGKASCGDLDIVITHPDGTS
HKGFLPKYVKQLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLCTYLGRELRHRIDLKVYP
LEIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLFPATHGSSGSKRGVRASASLKFD
TEKEVFDFLGFPWLEPHERNL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaagacaaccagaaatcaaagtccaccgtccgatcctcagggaatgttcgct
ggattggtcgtattcttagtcgaaaaacgagttcagagccgtcgtttacagatttggaag
caaaaattggtccaaatgggggctacaatcgaagacagcctaaccaaaagggtcactcac
atacttgctatggacccagaagccctcttacaacaactgggtagtgagcgcttggcgcac
tttaaaggaacagttgtagtttatcagtggctagaggatagtttgagctcaggagagaag
gtatctgaggatatgtaccatctaaaattggaagcagacaagtcttccaatgattacatt
tctagcgatgatgaaccgccaaaacccaaaaagctaagatcatcttctcctgatgacttg
gctcacacttcaatacccaaaacccctgaatctccaaataaggatcagatcactgcattg
cagtcggctgtgccctacaacccacctgacttgaataagaacataacccagatattcggg
aaacttatcaatatttatagagccttgggtgatgaccgaagatcgtttagctattacaag
gctgtaccagttatagagaagttgcctttcaagattcaaagtgtggaccaagttaaagac
ctacccaacattggaaagtctatgcaagatcatattcaggagatcgtgactactgggaag
ttatccaagttggagcactttgaaacagatgaaaaggtacgaacactcgccttatttgag
gaaatttggggtgttggtccagctactgcactgaaattatatgagaaaggacaccgcacg
ttagatgatttgaagaatgaagattcattaacaaattcgcaaaagttggggttaagatat
tatgacgatatcaaacagaggatcccacgccatgaggctgaagagatggaacatcttcta
cagaaagttggagagaatgttttgcccggggtggtcattgtatgtggtggatcatataga
cgcgggaaagcttcttgtggggatctagacattgtaattacacatcctgatggaacgagt
cataaaggttttctaccaaaatatgtaaagcagttaaaggatatgaagttcctacgagag
gatttgattttcagtacgcatagtgaggagggtactgattctggcgttgacacatatttc
ggactttgcacatatctaggaagagagttgcgacatcgcatagatcttaaggtttaccca
ttggagatatatgcatttggactaatagcttggacagggaatgatgtattgaataggagg
ttgagattactagctgaatctaaaggattccggcttgatgatacagggttgtttccagct
actcatggctcttccggcagtaaacggggggtgagagctagcgcaagcttgaaatttgac
acagaaaaggaggtgtttgatttccttgggtttccttggcttgaaccacatgagagaaat
ctgtga
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