Prunus persica (peach): 18791456
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Entry
18791456 CDS
T03092
Name
(RefSeq) endoribonuclease Dicer homolog 3a isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pper03036
]
18791456
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18791456
microRNA pathway
RISC loading complex
18791456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
ResIII
PAZ
dsrm
DND1_DSRM
NagJ_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
18791456
NCBI-ProteinID:
XP_020421897
LinkDB
All DBs
Position
G1:complement(35457357..35468011)
Genome browser
AA seq
1690 aa
AA seq
DB search
MVSEPLDHVADQDQQSSPISNDFNPSGYEANVYEVAKRRNTIAVVETGSGKDMVAAMLIS
DIGQAIKSSSSGAKKLIVFLTPTVHLVHQQFEVVKVNTNFKVEEYYGAKGVDSWTMECWE
KETNEHDVLVMTPQILLDALKKAFLSLEAVCLMIIDECHLATGKHPYAKIMKEFYYKSTD
KPKIFGMTASPVIRKGVSSSSDCVGQISELESTLDSQLYTMEDRKEKELYVPSAKETCIF
YDQAWFPSSDLKAKMEASWAKIDASLSKLQELVESNFKDMDDTMKTLRKRLSDDYTNILY
CLDNLGLICTHEAVKVCLDNAPCKEEYELYRESSSQCRYFLEEVLGIIRESFLHGGEIFL
DFGFDYLKAVNLGYISPKLNELVQLFHSFGGSREELCLILVDRIITAKVIGRFMKKVTSL
CHFTVSYFTGTNTSVDGLAPKIQKETLELFCSGEVNLLFTTDVVEEGIHFPNCSCVVRYD
LPKTVRSYVQSRGQAGQNNSQFITMLERGNKKQRDQLYEIVRREYLMTDSATNRDPETCV
LKVCTTEERNAYTVDATGASVTADSSVSLVQKYCEMLPGDKNFIPRPTFHYSYLGDSYEC
RIALPPHAAFQTIVGPVCKKSSLSKQLVCLEACKLLHQMGALNDHLLPAIDKPPENDLDV
KSKDPASGAGTTKRKELHGTTCIHTLSGTWGGKLDGAVFQAYKFDFSCEIVSEFYSGFTL
LIESKLADDVGNIELELYLISKTVKSSVSSCGQVHLDGEQMAKAMCFQEFFCNGLFGRLF
HGTKSAGNRREFLLEKETRNLWSPLYMYLLLPLESLNDSSNGTWRINWTGINSCVSAVEF
LKKNSSLGSHHCYGDTRNFLPSRTVSSETKCNIAEIIHFANCSVNVANLKDMVVVAIHTG
RIYSVAEVLSNTSAESPFDGKKDNVPSKYSTFSEYFNNKYGIVLQYPGQPLLRLKQSHNP
HNLLVNFSGEGGGGIERQRMYAQMPPELLVSIGVQRFVLKSFYLMPSLIHRLESLMLASQ
LREDINCHSSSFQISSSLILEALTTLRCNEDFSMERLELLGDSVLKYAVSCHLFLKYPKK
HEGKLSNLRQWAICNSNLHKLGINRKLQGYIRDGAFDPRRWVAPGQISLRPAPCNCGVDT
LEVPVDSKFQTEDPKVVVGKSCDKGHRWMCSKTISDCVEALIGAYYVSGGLPAALHLMKW
FHIDAELEPSLVAEAITTASLRSYNPKANEIAILESKLHYEFSTKGLLHEAITHASEQES
GVGCCYERLEFLGDSVLDLLITRHLYDSHTNIDPGELTDLRSASVNNENFAQVAVRQNLQ
QHLQHSSGLLLSQITEYVKSLSEPDNGTTLQGTKGPKALGDMVESIAGAILIDTELNLDE
VWRIFKPLLSPIVTPDKLELPPLRELIELCDSLGYFIKETCTKKGETVHAKLTVQLKDVL
LIGEGCDRTKKAAKGEAARRLLKELEVCWFSKCPIRFELAVPVWVQVSWVLGSKRSGVQI
FCLGFCPGPRFKKRDISYSWCSKKRKLGSEGVGDSSLLDINYNVCSQVNVEDSSERVIYK
KKRTTEIIGVFRSVNESKTSSPNDTAPVIKSINMKKGGPRTSFYELCKKQQWKRPDFESS
ETKSRTPIDFGEGSSAHFSSFVSKITLHIPNFGDIECTGDARPDKKSSEDSAALAMLYEL
ERQGKLIIGG
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggtctctgaaccgcttgatcatgtcgctgatcaggatcaacaatcatccccgatttcc
aatgacttcaaccccagcgggtatgaggcaaatgtttatgaggttgcgaagaggaggaac
accatagcagtggtggagacaggttctgggaaggatatggtagctgcgatgctcatcagt
gacattggtcaagctatcaagtcaagctcaagtggtgccaaaaaattgattgtatttttg
actccaactgttcatttagttcatcagcaatttgaggtcgttaaagtaaacacaaacttt
aaagtggaagagtattacggagctaagggggttgattcatggactatggagtgctgggaa
aaggaaacaaatgagcatgatgtgctagtaatgacaccccagattctgttggatgccttg
aaaaaggcattcttgagcttggaagcggtatgcttgatgattattgatgagtgccatcta
gctactggaaagcatccatatgcaaagataatgaaggaattttattacaagtctactgac
aagccaaagatttttgggatgacggcatcacctgttatcagaaaaggtgtctcatcttca
tcagattgcgtgggccagatatcagaacttgaaagcactttagattcccagctttatact
atggaggacagaaaagagaaggaactgtatgtcccatctgcaaaagaaacttgtatattt
tatgaccaagcatggtttccgagttcggatttaaaagcaaagatggaagcctcgtgggcc
aagattgatgcttcattgtcaaagttgcaagaattagtagaaagtaatttcaaagacatg
gatgatacaatgaagacactgcggaaacgattgtctgatgactacacaaatatcttgtat
tgccttgacaaccttggtctcatatgtactcatgaggctgtcaaggtctgtctagataat
gctccttgcaaagaggagtatgaactttatagagaaagctcttctcagtgcagatatttt
cttgaggaagtgcttggtataataagggaatcgtttctgcatggtggtgaaatttttttg
gattttgggtttgattatttgaaggcggtaaatttgggctacatatctccgaaattaaat
gaacttgttcaactttttcattcatttggaggatctagggaagaactgtgccttatactt
gttgataggattatcacagctaaagtgattggcagattcatgaaaaaagttacctcttta
tgtcatttcacggtttcctattttactggaactaatacatcagttgatggtctggccccg
aaaatacaaaaggagacattggaattattctgctctggggaggtcaatttattattcact
accgatgtagttgaggagggaattcattttccaaactgctcctgtgtggtacgttatgac
ctgccaaagacagtccgtagttatgtccagtccaggggacaggctgggcaaaataactct
caattcattacaatgctggagaggggaaacaagaaacaaagggatcaactatatgagatt
gtcaggagagaatatttgatgacagattcagctacaaatagagatcctgaaacatgcgtt
ttgaaagtatgtactacggaggaaagaaatgcatatactgtggatgccactggagcatca
gtcacagcagattctagtgtcagtcttgtacaaaaatattgtgaaatgctacctggggat
aagaacttcattccgaggccaacttttcactactcatatcttggagactcttatgagtgt
agaattgcattacctccacatgcggctttccaaacaatagttggtcctgtatgcaagaag
tcttctttatcaaagcagcttgtatgcttggaagcatgtaagctgttacatcaaatgggt
gccctgaatgatcatcttcttccggccattgacaagcctccagaaaatgatcttgatgtg
aaaagcaaagatccagcttctggcgcaggaacaactaaaaggaaggaattacatggtaca
acttgcattcatacactatctggaacttggggaggaaaacttgatggtgccgtttttcag
gcttataaatttgacttctcctgtgaaattgttagcgaattttattctggatttactctt
ctgattgagtcaaagcttgctgatgatgtggggaatattgaattggaactttacctgatt
tcgaagacagttaagtcttctgtttcttcctgtgggcaagttcatttggacggggaacag
atggcaaaagcaatgtgctttcaagaatttttctgtaatggattgtttgggagattgttt
catggaaccaaatcagctggaaatcggagagaatttttacttgagaaagaaacaagaaat
ctgtggagcccattatacatgtatttgcttcttccacttgagtcattgaatgattcaagt
aatggaacttggagaataaattggacagggataaattcttgtgtttctgcagtagaattc
ttgaagaaaaactcatctttgggaagtcatcattgttatggtgacacacgtaatttcttg
ccgagtagaactgtctcatctgagactaaatgcaacattgcagagataatccactttgct
aattgttctgttaatgtagcaaatctcaaagacatggtggtggtggctatccacactgga
agaatttactccgttgccgaggttctgagtaacacatctgctgagagtccttttgatgga
aaaaaagacaatgtcccctcaaaatatagtacattttctgagtacttcaacaataagtat
gggattgtgctccagtatccggggcagcctctgttgcgattgaagcaaagtcacaatcca
cacaaccttcttgtgaactttagtggtgaaggtggtggtggtattgaaaggcaacgcatg
tatgctcaaatgccacctgagcttctagtcagtattggtgtccaaagattcgttttaaag
tccttttatttaatgccgtcattgattcaccgtttggaatccttgatgctagcgagccaa
cttagagaagatattaattgtcattctagcagctttcagatatcaagctcattgattcta
gaagcacttacaacactcagatgcaatgaagatttttctatggagcgcttggaattgctt
ggggattcagttttaaagtatgctgtgagctgtcacctctttctcaaatatcccaaaaaa
catgaaggaaaattatctaatttgcgccagtgggctatttgtaactcaaacctacataaa
ttgggaataaatcgcaaattacagggatatatacgtgatggtgcgtttgatccacgtcgt
tgggttgctccgggacagatttctctgcgacccgctccttgtaactgtggagtagatact
ttagaagtcccagtagatagcaaattccaaactgaagatcccaaagttgtggttggaaag
tcctgtgataagggtcatagatggatgtgttcaaaaacaatctctgattgtgttgaagcc
cttataggagcatactatgttagtggtggattgcctgctgcacttcatctgatgaagtgg
ttccatattgatgcagaacttgagccctctctggttgctgaagcaattactactgcatct
cttcgttcttacaacccaaaagctaatgagattgcaattttggagtcaaagcttcattat
gaattttctaccaagggtctcttacacgaggccataacacatgcatctgagcaggaatca
ggagttggctgctgttatgagagactagaatttctaggggattctgtgttggacctgctt
atcacaaggcatctctatgatagccacacaaatattgatccaggcgagttaactgactta
cgttcagcttctgttaataatgaaaattttgcccaagttgctgttagacaaaaccttcag
cagcatctacaacattcctctgggttacttctaagccaaataacagaatatgtgaagtct
ctttctgaacctgacaatggtaccacacttcaaggcacaaaaggtcctaaggctcttgga
gacatggtggaaagtattgcaggggcaatactaattgataccgaacttaatcttgatgaa
gtgtggagaatatttaaaccattattatctccaattgtgacccctgacaagcttgagctg
cctccattgcgtgaactgattgaattatgtgactcactcgggtactttataaaagaaacg
tgtacaaagaagggtgaaacagttcatgcgaagcttactgtacagctgaaagatgttcta
ttgattggagaggggtgcgatcggactaaaaaagctgcaaaaggggaagcagctcgacgt
ttactgaaggaacttgaggtctgttggttctctaaatgtccaatcagatttgagctcgct
gttccagtctgggtccaagtttcttgggttctagggtccaagaggtctggggtccagatt
ttttgtcttgggttctgtcctggtccaaggttcaagaaaagagatatttcatactcctgg
tgttccaagaagagaaaattgggctctgaaggagtaggtgattcttctctcctagacatc
aactataacgtctgcagccaagtaaatgttgaagattcttcagagcgagtaatctataaa
aagaaaaggacaactgagataattggagtttttcggtcagtcaatgaatcgaaaacctct
agtcccaacgatactgcaccagttattaaatcaatcaacatgaagaaaggaggacctcga
acatctttttatgagctgtgcaagaaacaacagtggaaaaggcccgactttgaatcatca
gaaactaaatcaagaactccaattgactttggtgaaggctcaagtgcgcattttagcagt
tttgtctcaaagataacgttgcacatacccaacttcggcgacattgaatgcacaggagat
gctagacctgataaaaaaagttcagaagattctgcagcacttgccatgctttatgagctt
gagcggcaaggcaaacttatcattggtggatga
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integrated database retrieval system
