Prunus persica (peach): 18791628
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Entry
18791628 CDS
T03092
Name
(RefSeq) THO complex subunit 5A
KO
K13174
THO complex subunit 5
Organism
pper
Prunus persica (peach)
Pathway
pper03013
Nucleocytoplasmic transport
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18791628
09122 Translation
03013 Nucleocytoplasmic transport
18791628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18791628
03041 Spliceosome [BR:
pper03041
]
18791628
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
18791628
Spliceosome [BR:
pper03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
18791628
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
18791628
NCBI-ProteinID:
XP_007225268
UniProt:
M5XK81
LinkDB
All DBs
Position
G1:37139069..37143429
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AA seq
813 aa
AA seq
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MEDDEIEEGMLVEEEAVQTQKKPEKSPYEMLQESKSSVEEIVTKMLAIKQEKKPKSELRE
LVTQMFLNFVTLRQANRSILLDEDRVKAETESAKAPVDLTTLQLHNLMYEKSHYVKAIKA
CKDFKSKYPDIELVPEEEFFRDAPGHIKAPTLSNDVAHDLMMKRLNFELFQRKELCKLHQ
KLEIHKKGLLETIANRKKFLSSLPSHLKSLKKASLPVQNQLGLQHTKKLKQHHSAELLPP
PLYVVYSQFMAQKEAFDEQIELEIVGSVKDAQAFAHQQANKDTGVSTNAEASRLEDDAPD
EEDDGQRRRKRPKRVPVKQNLEQSGVYQVHALKIILHIHDDEASDPKSSKLMTLKFEYLL
KLNVVCVGIDGSHEAAENNILCNLFPDDTGLELPHQSAKLIVGDAPAFDERRTSRPYKWA
QHLAGIDFLPEVSPLLAAPETPSGDTAKHDVISGLSLYRQQNRIQTVVRRIRSRKKAQMA
LVEQIESLMKLKWPALSWESVPWVLHTPLCKLHGFSPLGPPPNPASSLSVIDKEQGQEPM
DVDLVGRSGSSKEELESMREDGELPSLVPVASVSSDNKLAHQKGANLDRSRRLALLSKSP
PISKAKSLSYKKHDEDSDLLLDIESDLDEPAHVVPEEENGVPIECFEVAGNSWMDFGVRE
FCLVLTRSIDTDKRKAKLEAKIKISTEYPLRPPFFALSLCSVSGDNHKESNDSECYNELR
AMEAEVNLHIVKMLPQSEENNILAHQVCCLAMLFDYYMDEASPSSKKRLSTSVVDVGLCK
PVIGQLVARSFRGRDRRKMISWKDMECTPGYPY
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatgagatagaggaggggatgctggtggaggaagaagctgttcagacgcag
aagaaaccagagaagtcgccgtacgaaatgcttcaagagagcaagtcctcagttgaggag
atagtgacaaagatgctcgccattaaacaagaaaagaaacctaaatcggagctccgcgag
ctcgtcactcaaatgttcctcaatttcgtcaccctccgccaggcgaatcgttcaatcttg
ctcgatgaagaccgagtgaaagccgagacggaaagcgcgaaggcaccggtggacttgacg
acgctgcagctccataatctgatgtacgagaagagtcactacgttaaagccattaaagct
tgcaaagacttcaagtccaagtacccagacatcgagctcgtgcctgaagaagagttcttt
cgcgacgcccctggccatatcaaagcgccgacattgtcaaacgacgtcgcgcacgacctt
atgatgaagaggctcaattttgagctgtttcagcggaaagagctctgcaagcttcatcag
aagctggagatacataagaagggtctgttggagacgattgcgaatcggaagaagttcctg
tcgagtcttccttcgcatctgaagtcgctgaagaaggcgtcgttgccggtgcagaatcag
ttagggcttcagcataccaagaagctcaagcagcaccactcggccgagttgcttccgccg
cctttatatgtagtttactctcagttcatggcgcagaaagaagcgtttgatgagcaaatt
gagttggagatagtgggaagtgtgaaggatgctcaagcttttgctcaccagcaagcaaat
aaagatactggcgtttcaaccaatgcagaggctagtaggctggaggatgatgcaccagat
gaagaagatgatgggcagagaaggagaaagcggccgaagagggttccagtcaagcagaac
cttgagcaatcaggggtatatcaagttcatgcgctgaaaatcatccttcatattcatgat
gatgaggcttctgatccaaagtcttcaaaacttatgaccctcaagtttgagtatttgttg
aagttgaatgttgtatgtgttggaattgatggatcccatgaggcagcggagaataacatc
ttatgcaacctattcccagatgacactggccttgagcttccccatcagtcagccaagctc
attgttggtgatgctcctgcctttgatgaaaggagaacttcccgtccatataagtgggct
caacatttggccggaattgatttcttgcctgaggtgtcacctttgcttgctgcccctgaa
actccaagtggtgatacagctaaacatgatgttatatctggtctgtcactttatcgccag
cagaatcgaatacagacagttgtacgaagaattcgctcccggaaaaaagctcagatggct
cttgtggaacagattgaatcacttatgaagcttaaatggcctgctttgtcttgggaaagt
gttccatgggttttgcatacccctttgtgcaaattgcatggtttttcacctctaggacct
ccacctaatccggcatcatctttgtctgtcatagataaggagcagggtcaggaacctatg
gatgttgatttggttggacgttctggttcttcaaaggaagagctggagagtatgagggaa
gatggggaacttccgtctttggttccagttgcatcagtttccagtgataataaacttgct
caccaaaaaggagctaatcttgaccgctccaggcggctggctttactttcaaaaagtcct
cctatcagcaaggcaaaatcgctaagttataagaaacatgatgaagattcagatcttttg
ctggatattgagagtgatcttgacgaaccagcacatgttgtgccagaggaagaaaatgga
gtgcctattgaatgctttgaggttgctggaaactcatggatggattttggggtcagagag
ttttgtcttgttttaaccaggagtatagacacggataagaggaaagcgaagttagaagcc
aagattaagatcagcacggagtatcctttgaggcctcctttttttgcattgagtctttgc
agtgtatctggagacaaccataaagagagcaatgactctgagtgctataatgaactccgt
gcaatggaagcagaggtcaatctgcacatagtgaagatgttacctcaaagtgaagaaaat
aatatcttagctcatcaggtttgttgtctggcaatgttgttcgactattacatggatgag
gcatccccgtcttctaaaaagagactgagcacttctgtggttgatgttggtttgtgtaag
cctgttattggtcagcttgttgccagatcttttagaggaagggatcgcaggaagatgata
tcctggaaggacatggaatgcactcctggctatccttactag
DBGET
integrated database retrieval system