Prunus persica (peach): 18791854
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Entry
18791854 CDS
T03092
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pper
Prunus persica (peach)
Pathway
pper03013
Nucleocytoplasmic transport
pper03015
mRNA surveillance pathway
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18791854
09122 Translation
03013 Nucleocytoplasmic transport
18791854
03015 mRNA surveillance pathway
18791854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18791854
03041 Spliceosome [BR:
pper03041
]
18791854
03009 Ribosome biogenesis [BR:
pper03009
]
18791854
03012 Translation factors [BR:
pper03012
]
18791854
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18791854
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
18791854
mRNA cycle factors
Stress granule specific factors
18791854
Spliceosome [BR:
pper03041
]
Complex C
Other components
EJC/TREX
18791854
Ribosome biogenesis [BR:
pper03009
]
Eukaryotic type
90S particles
Helicases
18791854
Translation factors [BR:
pper03012
]
Eukaryotic type
Initiation factors
eIF-4
18791854
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
18791854
NCBI-ProteinID:
XP_007222783
UniProt:
M5XD05
LinkDB
All DBs
Position
G1:complement(32366297..32370057)
Genome browser
AA seq
403 aa
AA seq
DB search
MAEALTRRGGGMTGDEKLEFVTSDGIEPIMSFDKMGLRDDLLRGVYNYGFEKPSAIQQRA
VRPIIEGRDVIAQAQSGTGKTSMIALTVCQLVDTSSLEVQALILSPTRELAAQTEKVILA
IGNFINIKAHSCIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDE
SDEMLSRGFKDQIYDVYRYLPPELQVCLISATLPHEILEITNKFMTEPVRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSAMH
GDMPQKERDAIMAEFRGGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcactgacgagacgcgggggagggatgaccggggacgagaagctcgagttc
gtgacgtctgatgggatagagccgatcatgagcttcgataagatgggtttaagggacgat
ctgctccgaggcgtctacaactacggctttgagaagccctccgccatccagcaacgtgcc
gtcaggcccatcattgagggccgtgacgtcattgctcaggcccagtccggtaccggcaag
acctccatgattgccctcaccgtctgtcagcttgtggatacctcttccctagaggttcag
gctttgatattgtctccaacaagggaattggcggcgcagacggagaaggtgatactagca
attggtaatttcataaatataaaagcccattcttgcattggaggcaaaagcgtaggcgag
gatatcagaaagcttgagtacggtgttcatgtggtgtctggaactcctggcagagtctgt
gatatgatcaagaggagaactcttcgcactcgagccattaaattattaattctcgatgaa
tctgatgagatgttgagtagaggcttcaaggatcagatttacgatgtctacagatatctt
ccacctgagcttcaggtttgcttaatttctgctacacttcctcatgaaattttggagatc
accaacaaatttatgactgaacctgtaaggatccttgtcaaacgtgatgagttgactttg
gagggaatcaagcaatttttcgttgcggttgaaagagaagaatggaagtttgatacgctt
tgtgatctttatgatactcttacaattacacaagctgttattttctgcaacacaaagcga
aaggtggactggctcactgaaaagatgcggagtaataactttactgtgtctgcaatgcat
ggagacatgcctcagaaggagagagatgctattatggccgagtttcgtggtggcactact
cgcgtcctgatcacaacagatgtttgggcccggggccttgatgttcagcaggtttccttg
gttatcaattatgatcttccaaacaaccgtgaactgtacattcatcggattggtcgttct
ggtcgttttgggcgcaagggtgtggcaataaactttgtcaaaagcgatgatattaagatc
ttaagagacatagaacagtattacagtacccagattgacgaaatgccaatgaatgttgcg
gacttgatatga
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