Prunus persica (peach): 18791979
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Entry
18791979 CDS
T03092
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pper03036
]
18791979
03400 DNA repair and recombination proteins [BR:
pper03400
]
18791979
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
18791979
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
18791979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_GCN1_C
TPR_DNAAF5
HEAT_GCN1
HEAT_2
HEAT_DAAF5
Cnd1
Motif
Other DBs
NCBI-GeneID:
18791979
NCBI-ProteinID:
XP_020418851
LinkDB
All DBs
Position
G1:complement(41345289..41359343)
Genome browser
AA seq
1371 aa
AA seq
DB search
MDQSALQLVSEIGTNLRRQARPNKDFIVKSLRQAASSLSQLEQASSPEALKKLKPLTEAI
VHGLLQHRDKDVRLLVAICVTEMFRVMAPEPPFVDKYLRDVFKLILSTFTELADTASPLF
SRRAKIVETVARCKCCVIMLDIDCSDLVLEMFNIFFSVARVHHQQTLINDVLSVMVHILN
EEASQPLLDVVLQNLVKEGRDADSASSQLAVSVIQTCADKLESFVCGFLTSCILDRDAVG
SELKEFYHEIIFKIFKCAPQMLLAVIPNLTQELLTDQVDVRLKAVNLIGKLFTLPDHHIA
QRYQDLFIEFLKRFSDKSVEVRVSALQCAKVCYMTNPSGVESQEVLSSLEGRLLDFDDRV
RTQAVIVACDLAMYNMRCFPPKLISQTTERLRDKKIPVRKKALQKMMEVYRDYCNKCSEG
YMTISDHFEQIPCKVLMLCFDKDCMEFRSQNMELVLAEDLFPAVLSVEERTRHWIHLFSL
FTPLHIKALNSILSQKQRLQSEMRTYLAIRKKEKGNNSEEMQKRYKVSFSKMAVSFADPS
KAEECFHKLNQMKDNNIFNSLALLLDELQFTDARTSRDTFLNMIGEKHQNFEFLRTLSSK
CSYNIFSSEHVRCILYDVSSKSPVNKHLEAASIRLLLAITSFFPVLLRGSESQFRMLLEE
SDPINEKLIEVLAKAGTHISVKLSEIYPFLKRVCLEGNRVQSKYAVSAVAALVDTSKQFI
FSSLCKELVDSLVGGQNIPTVLQSLGCLAQYSVSTFESQDGEITPCIYQKIFQVGSSDFV
DSFNDVSGCSDSCKLKIYGLKALVKSFLPHRGTQIKRQINVLWDILSTMLQKGETAEGIT
SCENDKACIRLAAAKSVLRLSRRWDFHISPEIFHFTISMAKDDSPLVRRLFLDKAHKLLK
EHAIPSRYACAFAMATSDCLKDLQDDSLKYMAEFVKDYSREAQLHQISGVQEGLITDFPA
YIVVFLIHLLAHDTSFPPMDSLDEETYARFCSPLFVLLQALINASNADGALDNVKDSVLY
LICIFRAIKRSEDVIDVERTPKLHVLADIGHSFVTLTNHNGLSASHAPGQILLPSSLYKS
NSRCLTQSCFDEHFVKRVIQIFKSNISLPASTLPKRGRKCQEDRTQADVVKDNKLILASC
KIVNLSKDGRAEAQKPEKEGNSTGGRRRKRALSPSAPGSVAFHDCSNNDYPSGVSKKSET
SLEKEILSSCDSVATISSLGGSNVSIQNFKSNTIDVEHSNHPRAKLKGPCSLKEISKKAE
ALVGQRIKFLSPVDKCFYSGTVDGYNSQNNTHKITCDSSGDVQLVCLASESWETISDDSL
EEKCLLVKSESCTLNSLHCSNDLVANSVVLDAAETKGGEESLCGHLSIRNY
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtccgcgctgcaactcgtttctgaaatcggcaccaatctccgccgtcaagct
cgcccaaacaaggatttcattgtcaaatcgctccgacaagctgccagttctttgtcacag
ttagaacaggcttcttcaccagaagctcttaagaagttgaagcccttgaccgaagctatt
gttcatggcttgcttcagcatagagataaagatgtcaggcttctggtggccatctgcgtc
actgaaatgtttcgagttatggcacctgaaccgcctttcgtggacaagtatctcagggac
gtttttaaactcattctcagcacgttcacggagctagctgataccgcgagcccactattt
tcaaggagggctaagatagtagagactgttgcacgatgtaaatgttgtgtgatcatgttg
gatattgactgcagtgatctagttctcgagatgttcaatattttcttctctgttgcgagg
gtacatcatcaacagactttgatcaatgatgttttgtctgtaatggttcatatacttaac
gaggaagcttctcagccacttttggacgtggttctccagaatcttgtgaaggagggaagg
gatgcagactctgcttcttctcaacttgcagtttctgtgattcaaacttgcgcagacaaa
cttgagtcctttgtttgtgggtttctaacatcttgtattttagatagagatgctgtagga
agtgagctcaaggaattttaccatgaaatcatttttaagatttttaagtgtgctcctcag
atgcttcttgctgtcatcccaaatttaactcaagaattactgactgatcaggttgatgtc
cgactaaaagctgttaatttaattgggaaactctttacacttcctgatcaccatattgcc
caaaggtatcaggacctcttcatagagtttttgaaaagattctctgataaatctgtggaa
gttagagttagtgccctacaatgtgctaaagtctgctacatgaccaatccctctggagta
gaatcacaagaagttctctcttctcttgaaggtcgactactagattttgatgatagagtg
agaacacaggcagtgattgttgcctgcgatcttgccatgtataatatgagatgttttcct
ccaaaactaatatctcaaaccactgaaagacttcgggacaagaagatacctgttaggaag
aaggcgctgcagaagatgatggaagtatatcgagattactgtaacaaatgttctgaaggc
tacatgacaataagtgatcactttgaacagattccatgtaaagtcttgatgctctgcttt
gataaagattgtatggagttcaggtcccagaatatggagcttgttcttgcagaagattta
tttccagctgttctttcagttgaggaacgtacacggcactggatccatttgttttctctt
ttcacccctcttcacataaaggctttgaactcaattttatcgcagaaacaacggttgcaa
agtgagatgcgaacttatttagccatacgaaagaaagagaagggtaataattcagaagag
atgcagaagagatataaagtttcattctcgaaaatggcagtctcctttgcagacccttcc
aaagcggaagagtgctttcacaaattgaaccaaatgaaagataataacatttttaattcg
ctggcgctgttattggatgaactacaatttacagatgcccggaccagcagagacacattc
ctaaatatgattggggagaaacatcaaaattttgagttcttacgaacactctcttcaaaa
tgctcttataatatattcagctcagagcatgttcgatgtattctatatgatgtttccagt
aagagtcctgtaaacaagcatttggaggctgcttccatcagacttcttctggcaattacc
agctttttccctgtcttgctgagaggttcagaaagccaatttcggatgttattagaggag
agcgacccaattaatgagaagttgattgaagtgttagccaaagcaggcactcacatatct
gtcaaactcagtgaaatctacccctttctgaagagggtttgtctggaggggaaccgcgtt
cagtcaaaatatgctgtttcagcggttgctgcattagttgatacttcaaagcaattcatt
ttctcaagtctatgcaaggaactggtggattctttagttggtgggcagaacataccaaca
gtgttacagtccttggggtgtcttgcacagtattctgtttcaacattcgaaagccaagat
ggagagatcactccttgtatataccagaaaattttccaagtgggctcttcagattttgtg
gactcattcaatgatgtgtccggatgtagtgattcttgtaaattaaagatatatggcctg
aaagcacttgtcaagagcttcttgccacatcggggaactcagatcaaacggcaaattaat
gtactctgggacattttgtcaacaatgctgcaaaagggtgaaactgcagagggtatcacc
tcatgtgaaaatgataaagcttgtattagattagctgctgcaaagtctgttcttcggctt
tctcgaagatgggatttccatatttctccagagatctttcactttacaatttcaatggca
aaggatgactctcctttggttagaagattatttcttgataaagcacacaaattactgaag
gagcatgctatacctagcagatatgcatgtgcttttgcaatggccacctcagattgcctc
aaggatctgcaagatgattcgttaaaatatatggcagagtttgtcaaggattacagtaga
gaagctcaactgcatcaaatctctggagtgcaagaaggattaatcactgattttccagca
tacatagtggtattcttgatccatcttcttgctcatgatacaagcttcccacctatggac
tctctagatgaagaaacatatgctcggttttgcagtccattgtttgttttactacaggct
ttaataaatgctagtaatgctgatggtgccctggataatgtcaaggattctgtcttgtat
ttgatctgcattttccgtgcaattaagagatctgaggatgttatagatgttgaaagaact
cctaagctgcacgttctagcagacattggacactcttttgtgacattaacaaatcataat
ggcctctccgcatcacatgctcctgggcaaattttgttaccatcatccttatacaaatct
aattcaagatgccttactcagtcatgttttgacgagcactttgtcaaaagagtaattcag
atatttaaatctaatatctctttgcctgctagtacacttcctaaacgcgggcgtaagtgt
caagaggatagaacacaagctgatgttgtcaaagacaacaaacttatcttagcatcttgc
aagatagttaatttgtccaaagatgggagagctgaagcccaaaaacctgagaaagaaggc
aacagtacaggaggacgtaggagaaaacgagctctctctccaagtgctcctggatcagtt
gcattccatgattgttctaataacgattacccaagtggtgtatctaaaaaatctgaaact
agtctggaaaaagaaatactttcatcttgtgattctgtagctacaatatcttctctaggt
ggatcaaatgtctcaatccagaatttcaaaagcaataccattgatgtggagcattccaat
caccccagggcgaagctgaagggcccttgcagcctgaaagaaattagtaaaaaggccgag
gcattggttgggcaacggatcaaatttttgtctccagtagataaatgtttttattcaggt
acagtggatggttataattctcaaaacaacacacacaagatcacgtgtgatagtagtggg
gatgttcaattggtatgcttggcaagtgagagctgggaaactataagtgatgactcactg
gaggaaaagtgtttgcttgtgaagtctgaaagttgcaccctgaattctttgcactgttcc
aatgatcttgtggctaactctgtagttttggatgcagcagaaacaaaaggtggggaggaa
agcctctgtggacacctcagcatcagaaattactga
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integrated database retrieval system
