Prunus persica (peach): 18792075
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Entry
18792075 CDS
T03092
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18792075
Transcription machinery [BR:
pper03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
18792075
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DUF4376
Motif
Other DBs
NCBI-GeneID:
18792075
NCBI-ProteinID:
XP_007222923
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Position
G1:37585709..37589120
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AA seq
555 aa
AA seq
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MGLGFRLNLKCGFPVHSSHWQTTSPSKISSTSVRGREGSFNSARLSFLSVISEEGEASSK
DPLKVYTFPSASPQILEDGVSELEEVKTAFRRVPKSFSDNQMPVAEGKFISSKGLEACTA
SHFSLLLQNLNVLEETFATSDVLKLEKEILLQLARLGALKLFDICLSRTLKTSSFLDLSD
IPTVPVEEGKMERKEDNNVGEIIVRSGKKEERRSRKRTSDNAIVSSNSLPPKTIWKGLKK
PTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKETGKVATLRCWAEAA
GVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDDLMQAGNLGLLQGAER
FDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAINQIQKARKANYNSHMKYP
DDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWESSDGTYMEFTPDTSLKSPEETVMRQ
HMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLFHVSKEWIRKIEKKALMKL
RVEESHKYLSHYLNN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgggttttaggctgaacctcaagtgtggctttcctgttcattcttctcactgg
caaaccacttccccttccaagatttcttcaacttctgttagaggcagggagggctctttc
aactcagcaaggttgtcctttctgtctgttatttctgaggaaggtgaggcttctagtaaa
gatcctctgaaagtttacacttttccatctgcttccccacaaatcttagaggatggtgtc
tcagaactggaagaggtgaagacagcctttaggagggtgccaaagagttttagtgacaac
cagatgcctgttgcagaaggcaagtttatatccagtaaaggcttagaagcatgcacggca
tctcattttagtttgttactgcaaaatcttaatgttttggaggagacttttgccacttca
gatgtgttaaagttggagaaagagattcttttgcaactagcaaggcttggagctctaaag
ttatttgatatctgtctatcgagaactcttaaaacctcgagctttttggatttgtctgac
atacctacagtaccggttgaagagggtaagatggagagaaaagaagataacaacgtaggc
gagattattgttcgttcagggaaaaaggaagaaagaagatcaagaaaaagaacatcagat
aatgccatagtgtcttctaattcattgcctccaaaaacaatttggaaaggtcttaaaaag
cctactctttcatcaggaaaaagagcatcaaattatagaagtagaagactgaccatttct
aaaaatgaggcagaaatgtcaatcggggttaaggtgatcgccgacttggagagaattaaa
gaaactttggaaaaggaaactggtaaagtagcgaccttaaggtgctgggcagaagcagcg
ggagttcatgaaaaggtgctgctacagcatttgcgttttggttggtattgccaggatgag
cttataaggagcactcgttccttagttctttaccttgctagaaactatagagggctaggg
gtagccttggatgatttaatgcaggctggaaacttgggtctcctgcaaggtgcagaaagg
tttgatcactcaaggggttatagattctcaacctatgttcagtactggataaggaaatca
atgtcaagattggtggcacagcatgctaggggggtccaaattccgttcacactaagcaag
gcaatcaatcagatacagaaagctcgaaaagccaattacaacagccacatgaaataccca
gatgatgaggaaattgcaaagattacaggtctttctttggcgagaatcagatcagctagt
acatgtctgagagttgtgggttcggtagatcataaaatgtgggaaagctctgatgggaca
tatatggaatttacaccagacacatcactaaagagccctgaagaaactgtcatgaggcaa
cacatgaaaaaggacattcatgatctgctgaaagggttgaatttgagagagaggcaagtg
ttggtactgcgatacgggctaaacaactacgaccccaagtcacttgaggagattggcaga
cttttccatgtgagcaaggagtggataaggaagatagaaaagaaagctctgatgaagctg
agggttgaagaatcccacaaatacttaagccattacttgaataactag
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