Prunus persica (peach): 18792149
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Entry
18792149 CDS
T03092
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pper
Prunus persica (peach)
Pathway
pper03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18792149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18792149
03036 Chromosome and associated proteins [BR:
pper03036
]
18792149
Transcription machinery [BR:
pper03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
18792149
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
18792149
PBAF complex
18792149
GBAF(ncBAF) complex
18792149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
18792149
NCBI-ProteinID:
XP_020409835
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All DBs
Position
G1:complement(40950940..40958316)
Genome browser
AA seq
802 aa
AA seq
DB search
MPASPSFPSDSRGKWRKRKRDPQIRRGKREDDDDEDDDAVAAAEDNDLEQNDDVSEDPHH
NPQSGAAPDPGPHETEVLDGGVRQSDFPPVVLRTVNRPHSSVLAIVALERANHSGGDAKG
PTSPIVLENVSYGQLQALSAVPADSPALDPDRADGAGSSYVVTPPSIMEGRGVVKRFGNR
VHVVPMHAADWFSPATVHRLERQVVPHFFSGKSSDHTPEIYMQCRNEIVAKYMENPEKRL
AFSDCSRLALAGRLSSDDLTRIIRFLDHWGIINYCAVAPSREPWSGSSYLREELNGEIHV
PSAALKSIDSLIKFDKPRCRLKAADVYSSLPCHDDDDVSDLDNTIRKRLSENHCNHCSCS
LPDVYYQSQKEVDVLMCSNCFHEGRFVVGHSSIDFIRVDSTKDYGDTDGENWTDQETLLL
LEAMEVYNENWNEIADHVGTKSKAQCILHFLRLPVEDGLLENIEVPGVSMSSNSSDRDGR
GGFHSNSNGDTAGSCPQDVDSESRFPFANSGNPVMSLVAFLASSVGPRVAASCAHAALTV
FSEDNGVSASGSILQMEGSGHRMNPESIHGREGGAHGNIANSLQQKEENTAGHGSRGQNE
AGTIPIPAEKVIAAAKAGLAAAAVKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFA
EVETFLMKECEQVEKTRQRMAGERARLMSARFGPAGVTAPMGLAGLGSSMSNSNTGTGRQ
QIMSPSASQPSVSGYSNNQPIHPHMPFVPRQSMLGLGPRMPLTSIQSSSSAPNAMFNAAG
TAQPTLNHPMLRPVPGTSSGLG
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctccttcattcccttcagactcccgcggcaaatggaggaagcgaaagcgc
gacccccaaattcgcagaggcaaacgtgaggacgacgacgacgaagacgacgacgcggtt
gctgccgcagaagacaacgacctcgaacagaacgatgacgtttcagaggatccccaccat
aacccccaatccggtgccgcaccggatcccggccctcacgagaccgaggtcctcgacggt
ggggtccgccaaagcgacttccctcccgtcgttttgcgcaccgtgaacaggccccactcg
tccgttcttgcaattgtggcgctcgagcgagccaatcacagcggcggggacgccaagggc
cccaccagcccgattgtcttagagaatgtgtcgtatggtcagctccaggcgttgtccgcg
gtgcccgccgatagtccggcgttggatccggaccgtgcagatggtgccgggtcgtcttac
gtggtcactccgccgtcgattatggaaggccgtggcgttgttaagcggtttgggaacaga
gttcatgtggttccaatgcacgcagcagattggttttcaccagccacagtgcatcgacta
gagagacaggtggtgccgcattttttctcaggaaaatcgtcagatcatactcctgagata
tacatgcaatgtaggaacgaaattgttgctaaatacatggaaaatccagagaagagactt
gcattttctgattgcagtagattagcattagcaggtcgtctaagttctgatgatttgact
cgaataattcgttttctggatcactggggaattatcaattactgtgctgtagcaccgagt
cgagagccttggagtggcagttcctacttaagggaggagctaaatggtgaaattcatgtg
ccatcagctgctctaaaatccattgatagtttaatcaaatttgacaagcccagatgtagg
cttaaggcagctgatgtttattcgtctttgccatgtcatgatgatgatgatgtctctgat
ttggacaacacaattcggaagcgtctatctgaaaatcattgcaatcattgttcttgttct
cttcctgatgtatactatcagtcacagaaggaggttgatgtacttatgtgctctaattgc
ttccatgagggaagatttgtggttggtcattcaagcatagatttcatacgggtggattca
acaaaagattatggtgatacagatggggagaattggactgatcaagaaacccttctgctg
cttgaggcaatggaagtgtacaatgagaactggaatgaaattgcagaccatgttggtaca
aagtcaaaagcacaatgcatccttcattttcttcgtttgcctgtggaggatggcctgctg
gaaaatattgaagttccaggcgtgtccatgtcttccaactcgtcagatagagatggtcgt
ggaggatttcattcaaactcaaatggggatacggcaggatcctgcccacaagatgttgat
tctgaaagcaggttcccatttgcgaattctgggaatccagtcatgtccctggttgcattt
ctggcctcttctgttgggccaagagttgctgcatcttgtgcccatgcagcattgacggta
ttttctgaggacaatggtgtatctgcttctggcagtattttgcagatggaaggatcagga
cataggatgaaccccgagagcatacatggtagagaaggtggtgctcacggaaatattgca
aattcacttcagcagaaggaagagaacacagcaggacatggttctaggggtcaaaatgag
gcagggacaattccaataccggcagaaaaagttatagctgctgccaaagctggccttgct
gctgctgcagtaaaggcaaaattatttgctgatcatgaagaacgggaaattcagagacta
tctgctaatatcataaatcatcagttgaagagattggagctgaagttaaagcagtttgca
gaagtggaaacttttctaatgaaagaatgcgaacaagtggagaagactaggcagaggatg
gctggtgaacgtgcccgtcttatgtcagctcggtttggacccgctggagtcactgcacct
atgggtttggcaggtcttggttcttccatgtctaatagtaacactggtaccggtaggcaa
caaataatgtcaccttcagcttcacagccaagtgtatcaggatacagcaacaaccaacca
atccatccccacatgccatttgtgccacgccaatcaatgttagggttggggccgaggatg
cccttgacatccatacagtcatcctcatcagctccaaatgccatgtttaatgctgcaggg
actgcccagccgactctaaatcatccaatgttgaggcctgtaccaggtactagctctggt
ctaggttga
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