Candidatus Purcelliella pentastirinorum: C9I82_039
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Entry
C9I82_039 CDS
T05580
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
ppet
Candidatus Purcelliella pentastirinorum
Pathway
ppet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C9I82_039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppet03400
]
C9I82_039
Enzymes [BR:
ppet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
C9I82_039
DNA repair and recombination proteins [BR:
ppet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C9I82_039
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C9I82_039
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C9I82_039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AXN02018
UniProt:
A0A346DZ63
LinkDB
All DBs
Position
complement(39452..40855)
Genome browser
AA seq
467 aa
AA seq
DB search
MIKNTFLFYDYETFGINPSLDKPAQFAAIRTDFDFNIIDKPKIYYCKLPDDYLPNPESVL
THKISPQKANLLGVSESKFAKLIYKLFLKKKNCIIGYNNIKFDDFFTRNIFYRNFFHPYM
WSWYNGNNNWDLINIIRSCYLLCPKNIKWPYKKNGIPSFRLEDFVKINKYKNIDSHDAMS
DVYATILIIKSIKKKKPKFFNFLFNNRKKNQLLSLIKKNKNIPFIYISNIFDVKKNIINI
ILPIKIYKKNVLVALNIMKDISLFLNNNINDKEKYLFNKNKKSSIIEIYLNKCPIIIPIN
LLNEISCKRLKINKKKYMKNIDFIKKYKIHKKIKNIYDYHKINDFKYKDNIDCQLYKRFF
TNKDYQLMEIIRKTNVNKLKLIDLDKYDERFKNLLFRYRARNFYYTLNNTEKKKWDKHKK
KYFNFPYIKNYLIKIKKLHLYYKNNLNNQKLLKKIYSYTKYLINLIN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaatacttttttattttacgattatgaaacttttggtataaatcctagtttg
gataaaccagcacaatttgcagctattcgtacagattttgattttaatattattgataaa
cctaaaatttattattgtaaattacctgatgattatttgccaaatccggaatccgtatta
actcataaaatatctcctcaaaaagctaatttattaggagtttctgaatcaaaatttgca
aaattaatatataagttatttttaaaaaaaaaaaattgtataataggatataataatata
aaatttgatgatttttttactcgtaacattttttatcgtaattttttccatccatatatg
tggagttggtataatggtaataataattgggatttaataaatattattcgtagttgttat
ttattatgtcctaaaaatataaaatggccgtacaaaaaaaatggaattcctagttttcgc
ttggaagattttgtgaaaataaacaaatataaaaatatagattcacatgatgcaatgtct
gacgtatatgctactatattgataataaaatcaattaaaaaaaagaaacctaaattcttc
aattttttatttaataatagaaaaaaaaatcaattattatctttaataaaaaaaaataaa
aatataccatttatatatatttctaatatttttgatgtaaaaaaaaacattataaatata
attttacctattaagatttacaaaaaaaatgtacttgttgcacttaatataatgaaagat
atttcattatttctaaataataatataaatgataaagaaaaatatttatttaataaaaat
aaaaaatcatccataatagaaatttatctaaataaatgtccaataattataccaataaat
ttattaaatgaaatttcttgtaaaagattaaaaataaataaaaaaaaatatatgaaaaat
attgattttataaaaaaatataagattcataaaaaaataaaaaatatttatgattatcat
aaaataaatgattttaaatataaagataatatagattgtcaattatataaaaggtttttt
acaaataaagattatcaattaatggaaataattagaaaaacaaatgttaataaattaaaa
ttaattgatttagataaatacgatgaaagatttaaaaatttactatttcgttatagagct
cgtaatttttattatacattaaataacactgaaaaaaaaaaatgggataaacataaaaaa
aaatattttaattttccttatataaaaaattatttaataaaaataaaaaaattacattta
tattataaaaataatttaaataatcaaaaattattaaaaaaaatatatagttatactaag
tatttaattaatttaattaattga
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