Candidatus Purcelliella pentastirinorum: C9I82_075
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Entry
C9I82_075 CDS
T05580
Name
(GenBank) exodeoxyribonuclease V subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ppet
Candidatus Purcelliella pentastirinorum
Pathway
ppet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C9I82_075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppet03400
]
C9I82_075
Enzymes [BR:
ppet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C9I82_075
DNA repair and recombination proteins [BR:
ppet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C9I82_075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
NAT10_TcmA_helicase
SH3_13
RecD_N
AAA_22
SLFN-g3_helicase
AAA_11
ABC_tran
AAA_29
PhoH
NB-ARC
nSTAND_NTPase5
AAA_28
T2SSE
Mg_chelatase
DEAD
NPHP3_N
NACHT
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AXN02053
UniProt:
A0A346DZ98
LinkDB
All DBs
Position
91253..93082
Genome browser
AA seq
609 aa
AA seq
DB search
MLKNISNIIKLFLKNKIITENNLDFAKILLKKKEKLLILIIATLHAEMKQGSSCLPIENI
LKKIKKQVPKNKKKKITKINILKSLLKFNMVSIYSENNITPIIIFNNKIYLYKIWKMENK
IAKFLNVNKKNNYINYKKLKININNLFNKIDKNLKIAAKLAITKKITFIMGGPGTGKTTL
IKKIIILLIYNAKKKINIKLATPTGKSAAKLTEEINKKIINKKITIKNKKYIPKQAYTIH
TLIGLDYYKNNIYYKKENKLNIDVLIIDESSMLDMQIISNIISAIPINTQIIFIGDKDQL
DPIGIGNILSDIYTLKKNKQNKSYINNKKNFKKNYKFNTLCNNIHILKKNYRFKKNSDIA
KMAKAINSNNIIKVKNLLNSNTKNIKLINVNKKNNYLILINKFIKIYKKILNMLQNKKPV
INIINYLNKYQLLCALKKGNFGTKKINNDIKSILIEKKLINYKSKMNKWYIGQPIIITKN
NYNLKIYNGNIGIILLDKNKKPNIFLKKKQKNIKKIPIEFIKHYKSAWSITVHKAQGSEF
EKVSLILPNEHIPILNKKLIYTAITRAKKKIIIYTNKKTLYKSIKYYIKRNTGLTEQINR
SYKKEKIIF
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaatatttcaaatataataaaattatttttaaaaaacaaaataattacagaa
aataatctagattttgcaaaaattctcttaaaaaaaaaagaaaaattacttattcttatt
attgcaacattacatgctgaaatgaaacaaggtagttcatgtttgccaatagaaaacata
ttaaaaaaaataaaaaaacaagtacccaaaaataaaaaaaaaaaaataacaaaaataaat
atcttaaaatcattactaaaatttaatatggtaagtatctatagtgaaaataacataact
ccaataattatatttaataataaaatatatttatataaaatatggaaaatggaaaataaa
atagctaaatttttaaatgtaaataaaaaaaataattatataaattacaaaaaactaaaa
attaatataaataatttattcaataaaatagataaaaatctaaaaatagctgcaaaactt
gcaataaccaaaaaaataacttttataatgggaggaccaggaacaggaaagacaacatta
ataaaaaaaataataatattattaatatacaatgccaaaaaaaaaattaatataaaatta
gccactcctactggaaaatcagctgctaaattaactgaagaaataaacaaaaaaataata
aacaaaaaaataacaataaaaaataaaaaatatattccaaaacaggcatatacgatacat
acattaataggtttagattattataaaaataatatttattataaaaaagaaaataaatta
aatatagatgttttaataattgatgaatcatccatgctagatatgcaaatcatatcaaat
ataatttcagcaataccaattaatacacaaataatttttataggagataaagatcaatta
gatcctatagggataggtaatatattgtcagacatatatacattaaaaaaaaataaacaa
aataaatcatatattaataataaaaaaaattttaaaaaaaattataaatttaatacatta
tgtaataatatacatattttaaaaaaaaattatcgttttaaaaaaaattctgacatagca
aaaatggctaaagcaataaattcaaataatataattaaagtaaaaaatttattaaattca
aacactaaaaatataaaattaataaatgtcaataaaaaaaataattacttaattttaata
aataaatttattaaaatttacaaaaaaattctaaatatgttacaaaataaaaaacctgta
attaatataataaactatttaaataaatatcaattactatgcgcactaaaaaaaggaaat
ttcggaacaaaaaaaataaataatgatattaaatcaattttaatagaaaaaaaattaata
aattataaaagtaaaatgaataaatggtacataggtcaacctataataataacaaaaaac
aattataatttaaaaatatacaatggaaatataggaataattttattagataaaaataaa
aaacctaatatatttttaaaaaaaaaacaaaaaaatataaaaaaaatacccatagaattt
ataaaacattacaaatcagcatggtctattacagtacataaagcacagggatcagaattt
gaaaaagtaagcttaatattaccaaatgaacatataccaatattaaataaaaaactaata
tatacagcaattacaagagcaaaaaaaaaaataataatatatacgaataaaaaaacttta
tataaatcaataaaatattatataaaaagaaatactggtttaactgaacaaataaatcgt
tcatataaaaaagaaaaaattattttttag
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