Candidatus Purcelliella pentastirinorum: C9I82_408
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Entry
C9I82_408 CDS
T05580
Name
(GenBank) Ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ppet
Candidatus Purcelliella pentastirinorum
Pathway
ppet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C9I82_408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppet03019
]
C9I82_408
03009 Ribosome biogenesis [BR:
ppet03009
]
C9I82_408
Enzymes [BR:
ppet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
C9I82_408
Messenger RNA biogenesis [BR:
ppet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C9I82_408
Ribosome biogenesis [BR:
ppet03009
]
Prokaryotic type
rRNA processing factors
C9I82_408
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AXN02361
UniProt:
A0A346E056
LinkDB
All DBs
Position
complement(423313..425583)
Genome browser
AA seq
756 aa
AA seq
DB search
MSIIIMKRMLINATQKEELRVALVDGQNLYDLDIESPRYEQKKSNIYKGKIIRIEPSLEA
AFVNYGTEKHGFLPLKEISNEYYPKGYNKINKLNIKEILSEGQEIIIQVNKEERGNKGAA
LTTFISLAGSYLVLMPNNPKAGGISRKIEGEERIEIKELTSLLKIPNGMGIIIRTAGLGK
TINSLQWDLNFRLKHWESIKKLAKKKSSPFLIYQESNIIIRAFRDYLKPDIEEILIDNPN
ILKLAHKHITELGRLDFNNKIKLYKGEIPLFNYYQIESQIETAFQRKVKLPSGGDIIIDT
TEALTSIDINSSQSKKGIDIEETAFHTNHEAINEISRQLRLRDLGGLIVIDFIDMSSVKN
QRIIENKLKEIIKEDRARIQINHISKFGLLEMSRQRLSTSLRESSHYVCPRCNGTGNIRD
NESLALSILRLIEEKSTKENTYKVHVFVPVKVASYLLNEKRDALNEIEQRQKRVKIIIVP
NKKIETPNYLVSRICKKKENNILSYELYKKYKSKIKCTNEVEKYKKKQYSNINEIKNKYN
IKKEYTNNYLIKNLYYKKIFIIIKKFLSLKNLIKKIKNIININLLNKIPKKKEKNNQIKY
IYFKNIKSKKNKITNVLKLQNKNNKILKIKKQNIKNKKIKNKKLIKKIDYAMYTLEWTMC
KICTSKNIIQKNILNNTKYKNQKNNKKIKKIKNIIKNKNIKINKKQKNINLKNNYKNLIK
KTKKLSKNFGYKHVSAPITKIKNSKTKNKIKKINSE
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgagtataattatcatgaaaagaatgttaataaatgcaactcaaaaagaagaattaaga
gttgctttagttgacggacaaaatttatatgatttagatatagaaagtccaagatatgaa
caaaaaaaatctaatatatacaaaggaaaaataataaggattgaaccaagtttagaagca
gcatttgtaaattatggaacagaaaaacatggatttctacccttaaaagaaatatcaaat
gaatattatcctaagggttataataaaataaataaacttaatataaaagaaatattatca
gaaggacaagaaataataatacaagttaataaagaagaaagaggaaataaaggagctgcc
cttactacatttattagcctagcagggagttacttagtattaatgcccaataatcccaag
gctggaggtatatcacgtaaaatagaaggtgaggaaaggatagaaataaaagaattgact
tcattattaaaaataccaaatggtatggggataataataagaacagcaggattaggaaaa
actataaattcattacaatgggatttaaattttagattaaagcattgggaatctataaaa
aaattagctaaaaaaaaatcttcaccatttttaatatatcaagaaagcaatataataatt
cgagcatttagagattatctaaaaccagatatagaagaaatattaattgataaccctaat
atattaaaattagcacacaaacatataactgaattaggaagattagattttaataacaaa
ataaaattatataaaggtgaaatcccactttttaattattatcaaatcgaatcacaaatt
gaaactgcatttcaaagaaaagtaaaattaccatccgggggagatataataatagataca
acagaagcattaacatctatagacataaattcttctcaatctaaaaaaggaatagatata
gaagaaactgcatttcatactaatcatgaagcaataaatgaaatatcaagacaattaaga
ttaagagatttaggaggattaatcgttatagattttatagatatgtcatcagtaaaaaat
caaagaataatagaaaacaaattaaaagaaataataaaagaagatagagctagaattcaa
ataaatcatatttccaaatttggattattagagatgtcaagacaaagattaagtacatct
ctaagagaatcaagtcattatgtatgtcctagatgtaatggaacaggtaatattagggat
aatgaatcactggcactatctattctaagactaatagaagaaaaatcaacaaaagaaaat
acatataaagtacacgtatttgtacctgttaaagttgcctcatatctacttaatgaaaaa
cgtgatgcattaaatgaaatagaacaaagacaaaaaagagtaaaaataattatagtacca
aataaaaaaattgaaacaccaaattatttagtatctagaatatgtaaaaaaaaagaaaat
aatatattaagttatgaattatataagaaatataaatctaaaataaaatgtacaaatgaa
gtggaaaaatataaaaaaaaacaatattctaatataaatgaaataaaaaataaatataat
attaaaaaagaatatacaaataattatttaataaaaaatttatattacaaaaaaattttt
ataataattaaaaaatttttatctttgaaaaatctaatcaaaaaaataaaaaatataata
aatataaatcttttaaataaaattcctaaaaaaaaagaaaaaaataatcaaataaaatat
atttatttcaaaaatataaaatcaaaaaaaaataaaataaccaatgtactaaaattacaa
aataaaaataataaaatattaaaaataaaaaaacaaaatatcaaaaataaaaaaataaaa
aataaaaaattaataaaaaaaatagattatgcaatgtatacattagaatggacaatgtgt
aaaatatgtacatcaaaaaatattatacaaaagaacatactaaataatacaaaatataaa
aatcaaaaaaataataaaaaaataaaaaaaattaaaaatataattaaaaataaaaatata
aaaatcaataaaaaacaaaaaaatattaatctaaaaaataactacaaaaatttaattaaa
aaaacaaaaaaattatcaaaaaattttggatataaacatgtaagtgcccctataacaaaa
ataaaaaacagcaaaacaaaaaataaaataaaaaaaattaatagcgagtaa
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