Pectobacterium peruviense: DUT67_01350
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Entry
DUT67_01350 CDS
T10302
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ppeu Pectobacterium peruviense
Pathway
ppeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DUT67_01350 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppeu03021
]
DUT67_01350 (rho)
03019 Messenger RNA biogenesis [BR:
ppeu03019
]
DUT67_01350 (rho)
Transcription machinery [BR:
ppeu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DUT67_01350 (rho)
Messenger RNA biogenesis [BR:
ppeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DUT67_01350 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
XDF55098
LinkDB
All DBs
Position
292149..293408
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccagtttctgagttaattactcttggcgaaaat
atgggcttggaaaaccaagctcgcatgcgcaaacaggatattatcttctctattctgaag
cagcatgccaaaagcggcgaggatattttcggcgacggtgtgctggagatactgcaggat
ggcttcggctttctccgctccgcagacagctcctacctcgcaggccccgatgatatctac
gtttctcccagccaaatccgccgttttaaccttcgcactggtgacaccatttctggcaag
attcgtccgccgaaagaaggtgaacgctactttgcgctgctgaaagttaacgaagtcaac
tacgacaaacctgaaaacgcccgcaacaagatcctgttcgaaaacttaacaccactgcat
gcaaactctcgtctgcgtatggagcgtggtaacggttcgacagaagatctgacggcgcgt
gtgctggatctggcttcgccaattggtcgtggtcaacgtggtctgatcgttgcgccgcca
aaagcgggtaaaaccatgctgctgcaaaacattgcgcagagcattgcttacaaccatcct
gactgtgtgctgatggtgctgctaattgacgaacgtccggaagaagttaccgagatgcag
cgcctggtgaaaggtgaagtggttgcgtcaacgtttgacgaaccagcttcccgtcacgtt
caggtcgctgaaatggtgatcgaaaaagcgaagcgtctggttgagcataagaaagacgtt
atcatcctcctggactcgattacccgtttggcgcgtgcttacaacaccgttgttccggcc
tcgggcaaagtgttgaccggtggtgtggatgccaacgccctgcatcgtccgaagcgtttc
ttcggtgcggcacgtaacgttgaggaaggcggtagcctgacaatcatcgctactgcgctg
gttgataccggttccaaaatggacgaagtgatttacgaagaatttaaaggtacaggtaat
atggaactgcacctggctcgtaaaatcgcagaaaaacgcgtgttcccagcgattgattac
aaccgttctggtacgcgtaaagaagagttgcttaccacctctgaagaattgcagaagatg
tggatcctacgcaagatcatccacccaatgggtgagatcgatgcgatggaattcctcatc
aataagttggcgatgacgaaaaccaacgatgaattcttcgatatgatgaaacgttcataa
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