Pectobacterium peruviense: DUT67_01550
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Entry
DUT67_01550 CDS
T10302
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ppeu Pectobacterium peruviense
Pathway
ppeu00300
Lysine biosynthesis
ppeu00470
D-Amino acid metabolism
ppeu01100
Metabolic pathways
ppeu01110
Biosynthesis of secondary metabolites
ppeu01120
Microbial metabolism in diverse environments
ppeu01230
Biosynthesis of amino acids
Module
ppeu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppeu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DUT67_01550 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DUT67_01550 (dapF)
Enzymes [BR:
ppeu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DUT67_01550 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
GvpH
Motif
Other DBs
NCBI-ProteinID:
XDF55131
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Position
334520..335344
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AA seq
274 aa
AA seq
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MQFAKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHCGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIAVSTQTGRMVLSVTDDELVRVNMGE
PNFEPQQVPFRAVKAEKTYIMRADEHTVLCGVVSMGNPHCVIQVEDVATAKVETLGPLLE
SHERFPERANIGFMQIVDSQTVRLRVYERGAGETQACGSGACAAVAVGIQQGLLSAKVRV
SLPGGELDIQWDGPGHPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcgctaagatgcacgggttaggcaacgatttcatggttgttgatgccgttacg
caaaacgtttatttttcacccgaattgattcgccgcttggcggatcggcactgtggtgtg
ggattcgatcaactgttggtggttgagccgccctacgatcctgaactggattttcattac
cgtatttttaatgcggatggcagcgaagtggcgcagtgcggtaatggcgcgcgctgcttt
gctcgctttgttcgcttgaaagggttaaccaacaagcgtgatatcgccgtcagtacgcag
actggccggatggtgctgtcggtgaccgacgatgaactggttcgtgtcaacatgggcgaa
ccgaatttcgagccgcagcaggtgccttttcgcgcggtcaaagcggagaaaacctacatc
atgcgtgccgacgaacacacggtactgtgtggcgtggtgtcgatgggcaacccgcactgt
gtgattcaggttgaggatgtggcaacggcgaaggtggaaacactagggccgctgctggaa
agccacgagcgttttcctgaacgcgccaatatcggttttatgcagatcgtcgatagccag
accgtccgtctgcgggtgtacgagcgcggtgcgggagaaacgcaggcgtgtggtagcggc
gcgtgtgctgccgtggcggtagggatccagcagggattattgtccgcgaaagttcgcgta
tcgctgccgggcggggagttggatattcagtgggatgggccgggacatccgttattcatg
accgggcctgcaacgcatgtctacgatggatttattcatttatga
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