Pectobacterium peruviense: DUT67_01870
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Entry
DUT67_01870 CDS
T10302
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppeu Pectobacterium peruviense
Pathway
ppeu00300
Lysine biosynthesis
ppeu00470
D-Amino acid metabolism
ppeu01100
Metabolic pathways
ppeu01110
Biosynthesis of secondary metabolites
ppeu01120
Microbial metabolism in diverse environments
ppeu01230
Biosynthesis of amino acids
Module
ppeu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppeu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DUT67_01870
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DUT67_01870
Enzymes [BR:
ppeu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DUT67_01870
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
XDF55192
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All DBs
Position
418399..419802
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AA seq
467 aa
AA seq
DB search
MSNLFSFAAVSSPAVTQAYWPERLTPYLDSEIEQFLFNSPQRLSWLVEQYGSPLNIVWPH
TVANNIEALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGIGVDVSSLQELKDALRAG
CDGTRLCATGPAKTREFLTELVHHRALIVLDSPEEFDDVLALAALLRVTKPVRVLLRYRP
SFTQASRFGMLADEVMLCLETLSTRQDVLHLEGFHFHLGGYAPDTRVSALAELLPLLERA
RSRGLQPAMIDIGGGLPIQYLSASRYQAYLAEQNEADYRHGQVPTSFYPYGGERSAADYL
EAFLSASIGQYCVADILKQYGLILAIEPGRSLADQSAITVFRVTRTRRQPDGNHVVFVEG
SSFSACETWFNSEFLIDPLHVFSVKKDTRPTPGKAWIAGHSCLDDDVITNRLIHFQTVPQ
PGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGELIFSSDN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctgtttagctttgccgcagtgtcttcccccgctgtcacgcaggcctactgg
cctgagagactgacgccttatctggatagtgagattgagcagttccttttcaactcgccg
caaaggctgtcatggctggttgagcagtatgggtcgccattgaatattgtctggccgcac
actgtcgccaacaatatcgaggcattgcgaaccgtgttgcagcgtcacgatgtggactgt
cgcctgtactacggcgcgaaggtgaacaaatcgccggggctggtacaggcggccgtcaac
gcgggcatcggcgtggatgtctccagcttgcaggaactgaaagatgcgctgcgggctggc
tgcgacggcacgcggctgtgcgccaccggtccggccaaaacgcgcgagtttctgactgag
ttggttcatcatcgcgcgctcatcgtgctggattcgccagaagagttcgacgacgtgctg
gcgctggcggcgttgttacgcgtgacgaaaccggtgcgggtactgctgcgctatcgccca
tcgttcacacaggccagccgttttggcatgctggccgatgaggtcatgctctgtctggag
acgttaagcaccagacaggatgtgcttcatcttgaaggcttccatttccacctgggtggc
tatgctcccgatacccgagtgagcgcattggctgagctgttgccattactggagcgggcg
cggtcacggggtttgcagcccgcgatgattgatatcggcggtggattgccgattcaatat
ctttcggcttctcgctatcaggcatatttggcggagcagaatgaggcggattaccgccac
ggtcaggtgccgacctcgttttacccgtacggcggcgagcgctcggcagccgactatctt
gaggcattcttgtcagcctcaattgggcagtattgcgtggcggacatactgaaacagtat
ggcctgattctggcgattgagccggggcgcagtctggccgaccaaagtgcgattaccgtg
tttcgcgtcacgcgtacgcgccgccagccggatggcaaccacgtcgtgtttgtcgaaggt
agcagctttagcgcgtgcgagacctggtttaactctgagtttttgattgatcctctgcat
gttttttccgtcaaaaaagacacacgtccgacgccgggtaaagcctggatcgccggacac
agctgtctggacgacgatgtcattacgaaccgattgattcattttcaaaccgtgccgcag
ccaggcgatttactgatttacgcgaatacggcgggataccagatggacctgctggagaac
gcgtttcatcgacatccgctgcctgcgcgcctgtgcgctttcaaaggtaagaaaggtgag
ctgattttttccagtgataactga
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