Pectobacterium peruviense: DUT67_03220
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Entry
DUT67_03220 CDS
T10302
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ppeu Pectobacterium peruviense
Brite
KEGG Orthology (KO) [BR:
ppeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppeu03021
]
DUT67_03220 (rapA)
Transcription machinery [BR:
ppeu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
DUT67_03220 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
XDF55436
LinkDB
All DBs
Position
complement(703477..706380)
Genome browser
AA seq
967 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVNTRMITLLFPASGENRLYSRSDAPITRVMFNPGDT
VTSHEGWQLKVDDVREEKGLLVYCGQRLDDETPAELREVFLDSKLTFNKPQDRLFAGQID
RMDRFALRYRARKHQNEQALQQWGGLRGMRASLIPHQLHIAHEVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRASRVLIVVPETLQHQWLVEMLRRFNLLFSLFDDGRYAEAKLD
SSNPFETEQLVICSLGFVQRSAQRFAQLVNADWDLLVVDEAHHLVWSEESPSPEYQAIET
LARATPAVLLLTATPEQLGQQSHFARLRLLDPNRFHDYQEFVAEQQQYRPVADAVTLLLA
GEKAQTAELNALSDLLGEQDIEPLLKAINSDSDDNQKARQELITMLMDRHGTSRVLFRNT
RQGVKGFPQRVLHQIRLPLPAQYQTAIKVSGIMNANKPLETRARDMLYPEQIYQQLEGDD
ATWWNFDPRVEWLLNYLTANRDEKVLVICAQAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFASEEEGAQVLICSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRIG
QAREIQILVPYLESTAQALLVRWYHEGLDAFEHTCPTGRTIYDAHHTQLIERLTTVGEQQ
GLDEFIHTCRQQHDSLKQQLEQGRDRLLEMHSNGGEQAQLLAQAIAEQDNDVNLVTFALN
LFDIVGINQEDRSDNLIILTPSDHMLVPDFPGLPQDGCTITFDRDQALSREDAQFISWEH
PLIRNGLDLVLSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTPV
RLLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQSDVHAMLQQAEALVETQARQ
LITEAQQQADLQLRRELERLEALKAVNPNIREDELTALENQREQVLSNLHEANWRLDAIR
LVVVTHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcagcgctggatcagcgatacggaaagcgaacttggactggga
acggttgttgccgtcaatacgcgtatgataacgctgcttttccctgccagcggtgaaaac
cgactttattcccgcagtgacgcccccatcacccgcgtgatgttcaatcccggcgacacc
gtcaccagccatgaaggctggcagctcaaggttgatgacgtgcgagaagaaaaagggttg
ctggtgtattgcggccaacgcctggacgatgaaacaccggcggaactgcgcgaagtcttt
ctggacagcaaactgacgttcaacaaaccgcaagaccgcctgttcgccggacagattgat
cgtatggatcgctttgccctgcgctatcgcgcccgcaagcatcagaacgagcaggcactg
caacaatggggcggtttgcgcggcatgcgtgccagccttatcccccatcagcttcacatc
gcgcatgaagtcggccaacgccacgcaccacgcgttttgctggcggacgaagttggtctg
gggaaaaccattgaagctggtatgatcatccaccagcagttgctggcgggtcgtgccagt
cgcgtgctgattgtcgtaccggaaaccctgcaacatcagtggctggtcgaaatgctgcgc
cgctttaacctgctgttctcactgtttgacgacgggcgctatgccgaagccaagctggac
agcagtaatccgtttgaaaccgaacagctggtgatctgctcactgggatttgttcaacgc
agcgcccagcgttttgcgcagttagtcaacgccgactgggatctgctggtggtggatgaa
gcccatcatctggtttggagtgaagaaagccccagcccggaatatcaggccattgaaaca
ctggcacgcgccacccccgccgttctgctattaaccgcaacgccggaacaactcggccaa
cagagccactttgcgcgcttacgcctgctcgatcccaaccgtttccacgactatcaagaa
ttcgttgccgagcagcagcagtaccgcccagtcgccgacgccgtcacgctgttattagca
ggcgaaaaagcccaaacggctgaactgaatgcgctgagcgatctgctgggtgaacaggac
atcgagccgttgctgaaagccatcaacagcgacagcgatgataaccagaaggcgcgtcag
gaactgatcaccatgctgatggatcgccacggcaccagccgcgtgttgttccgcaatacg
cgccaaggcgttaaaggcttcccgcagcgtgtcctgcatcaaatccgcctgccgctgcca
gcgcagtatcaaacagcaatcaaagtttctggcattatgaatgcgaataagccgctggaa
acccgcgcgcgcgacatgctgtacccggaacaaatttatcaacagctcgaaggggacgat
gccacctggtggaacttcgatccgcgcgtggaatggctgctgaactacctgaccgccaac
cgtgatgaaaaagtgttggtgatctgcgcacaggcagcgacagcgctccagttggagcaa
gtgctgcgcacgcgtgaagcgatccgcgccgccgtcttccacgaagggttgtcgattctg
gaacgtgaccgcgccgccgcctattttgcgtctgaagaagaaggcgcacaggtgctgatc
tgttcagagattggctcggaaggccgtaacttccagtttgctagccatttagtaatgttc
gatctgccgttcaaccccgatctgctggaacagcgtattggtcgtctggaccgtatcggg
caggccagagaaattcagattctggtgccctatctggaaagcactgcacaggcgttgctg
gtacgctggtatcacgaagggctggatgcgtttgagcacacctgtccgacaggccgcacc
atctatgatgcccaccatacgcagttgatcgagcgattgacgaccgttggtgaacaacag
ggactggatgagtttatccatacctgccgccaacagcacgacagcctgaagcagcagctt
gaacaaggtcgcgatcgcctgctggaaatgcattctaacggtggcgaacaagctcagctg
ttggcacaggcgattgccgaacaggataatgacgtcaatctggtgacatttgctctgaac
ctgtttgatatcgttggcatcaatcaggaagatcgcagcgataacctgatcattctgacg
ccatccgatcatatgctggtgccggacttccctggtctgccgcaggacggttgtacgatc
actttcgatcgcgatcaggcactctcccgcgaagacgcacagtttatcagttgggaacac
ccgctcatccgtaacgggctcgatctggtgctgtccggtgataccggaagttgtgcggtt
tctttgctgaaaaataaagcgctgcctgtcggtacactgttggctgaactggtttacgtt
gtggaagctcaggcaccaaaacacttgcaactgactcgcttcctaccacccacgccggtt
cgcctgctgatggatcgtaaaggcacgaatctggcagcacaggttgagtttgagagtttc
aaccgtcagctcaacgcggtaaaccgtcatacttccagcaagctggtgaatgcagtgcaa
tccgatgttcacgccatgctgcaacaggctgaagcgctagtggaaacgcaggcgcgccag
ctcatcaccgaagcccaacagcaggccgatctgcaactgcgccgcgagttggaacgtttg
gaagcgctgaaagccgtcaatccaaacattcgtgaagatgagctgactgcactggaaaat
cagcgtgagcaggtgctgagcaacctgcacgaggccaactggcgtctggatgcgatccgt
ctggtcgtggtgacgcatcagtaa
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