Pectobacterium peruviense: DUT67_04555
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Entry
DUT67_04555 CDS
T10302
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppeu Pectobacterium peruviense
Brite
KEGG Orthology (KO) [BR:
ppeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppeu03016
]
DUT67_04555 (truD)
Enzymes [BR:
ppeu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DUT67_04555 (truD)
Transfer RNA biogenesis [BR:
ppeu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DUT67_04555 (truD)
Prokaryotic type
DUT67_04555 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
XDF55678
LinkDB
All DBs
Position
1022949..1023995
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AA seq
348 aa
AA seq
DB search
MENSEQLVWLHGEPQATGSLKSTAEDFLVVEDLGFQPDGDGEQVLVRVRKRGCNTQFVAE
MLAKFARLPLRAVSYAGLKDRHAVTEQWFCLHMPGKETPDFSLLELEGCDVLEVIRHRRK
LRIGTLRGNHFALVLRQVSDRNEVDARLAQIAASGVPNYFGSQRFGRNGNNLEQARLWAN
NDIRVKERSKRSFYLSASRSAMFNQVASARLAGPQAKTVLCGDALQLTGRGSWFVAKADE
LETLQVRLDAGELQITAPLPGDGELGTQDDALAFEEQALTGQETLWSLVKRERVEPARRA
VLLYPQQMQWEWQDDVTVAVKFWLPAGSFATSVVREVLHSQQDTDIGA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagcgaacaactcgtctggctgcacggtgaaccacaggctaccggctcattg
aaatccactgcggaagactttctggtggtggaagatctggggtttcaaccagatggtgat
ggtgaacaggtcttggttcgcgtacgtaaacgcggctgcaatacgcaatttgtggccgag
atgctggcgaaatttgctcgtctaccgctacgtgccgtcagctatgcgggtctgaaagat
cgccatgctgtcaccgaacagtggttttgcctgcatatgccgggaaaagagacgccagat
ttttctttgctggaactggaaggctgtgacgtgcttgaggttatccgccaccgtcgcaaa
ctgcggatcggtacactgcggggtaaccattttgctctggtactgcgtcaggtgagtgat
cggaacgaggttgacgcccgtttagcgcagatcgctgcgagcggcgttcctaattatttt
ggtagccagcgtttcggacgaaacggaaataatcttgagcaggcgcgtctttgggccaat
aacgatattcgggtaaaagaacgcagtaagcgtagcttttatctttctgctagccgtagt
gcgatgtttaatcaggtggccagcgcacgactggcgggaccgcaagcgaaaaccgttttg
tgtggtgatgcattgcagctaacggggcgcggcagttggtttgtggctaaagcggatgaa
ctggaaaccttgcaggtgcgccttgatgctggtgaacttcagattactgcgccgctgcct
ggagacggtgaactgggcacgcaggatgatgcactggcatttgaagaacaggcattgacc
gggcaagaaacgctatggtctttggtcaagcgtgagcgggttgaacctgcccggcgtgct
gtgctgctgtatccgcagcagatgcaatgggaatggcaagatgacgtgaccgtagccgtg
aaattctggctacctgctggcagttttgcgaccagcgtggtgcgtgaagtgttgcattct
caacaggataccgatatcggtgcctga
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