Pectobacterium peruviense: DUT67_07560
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Entry
DUT67_07560 CDS
T10302
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00361
nitrite reductase [NAD(P)H] [EC:
1.7.1.4
]
Organism
ppeu Pectobacterium peruviense
Pathway
ppeu00910
Nitrogen metabolism
ppeu01100
Metabolic pathways
ppeu01120
Microbial metabolism in diverse environments
ppeu01310
Nitrogen cycle
Module
ppeu_M00531
Assimilatory nitrate reduction, nitrate => ammonia
ppeu_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
ppeu00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
DUT67_07560 (nirB)
Enzymes [BR:
ppeu01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
DUT67_07560 (nirB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox
Rieske_2
Rubredoxin_C
NIR_SIR
Fer2_BFD
NIR_SIR_ferr
Pyr_redox_3
DAO
NAD_binding_8
GIDA
AlaDh_PNT_C
FAD_binding_3
FAD_binding_2
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
XDF56978
LinkDB
All DBs
Position
1664731..1668918
Genome browser
AA seq
1395 aa
AA seq
DB search
MKPHLIVIGNGMASARFVDALRQLAATRYRITVIGDEPRASYNRILLSPVLSGEKAFTDT
LLTPAAIDDDAALPVNTLLGERVTHIDRQAREVTTTQRQLHYDHLVLATGSTPFMPPMPG
IDLAGVCGFRTLDDVELMLATISQSVPAVVIGGGLLGIEAAAALRLRGADVTLLHRVPIL
MERQLDATASDLLCDSLCARGIACETDVQVAALHGDAHGVTAVELADGRTIPAGLVVVTA
GVIPASQLARECGLPCNRGVLVDGQLQTADPHISAIGECCELNGETFGLVAPCFAHATLV
AQRLAGHAPQDYQREQATTRLKVTGIGVVSGGDINVAPNDEVYTTFDPQTQHYRRLLLRD
GRLSGVLLYGDTDDSPRLLAAMDNTTEGEMIQPATLLFGLSSPDSDSQPEAVRIPVMSKP
ILVVVGHGMVGHYFLEQLVERDLHQHYHIVVFGKERHEAYDRVHLSEYFSGRSAASLSLV
KDGFFAESGIELRSASEIVAIDRERQCVCDAQGRETAYDKLVLATGSYAFVPPIPGNTRP
GCLVYRTLDDLDAIAAQAKKATSGVVIGGGLLGLEAANALRQLGLDTHVVEFAPRLMAVQ
LDDGGASMLRRKIEALGVQIHVSKETREITDGEQALHRLCFADGSVLETDLVLFSAGIRP
RDKLADSCDLEKGPRGGIVIDDRCQTSDDAIFAIGECALWKGQIFGLVAPGYQMARSVAD
TLAQRDTPFTGADMSTKLKLLGVDVASIGDAHGRTAGSQSYQWTDGPNEVYKKIVVSADG
KHLLGAVLIGDSSDYSTLLQMMLNDMPLPKQPEGLILPARSGDAPKGLGVAVLPASAQIC
SCHNVSKSDISAAVAGGCGELGALKTCTKAGTGCGGCVPLLKQVMEYELTQLGVEVKKDI
CEHFAYSRQELYHLIRVHEIRSFDGLLERYGHGLGCEVCKPLVGSMLASCWNDYLLQPQH
LPLQDTNDRFFANIQKDGTYSVVPRVPAGEITPAGLIAIGQVAQRYNLYTKITGGQRVDL
FGARLEQLPEIWRELIDAGFETGHAYGKSLRTVKSCVGSTWCRYGVQDSTGLAIQLEHRY
KGLRSPHKVKMAVSGCTRECAEAQSKDIGVIATDKGWNLYVCGNGGMKPRHADLFASDLD
TETLLRTIDRVLMFYIRTGDRLQRTSTWMDNLEGGIDYLRQVILEDSLNIGEELDKEMQR
VVEAYQCEWQTTLESPERLALFRGFLNSDNPDEAVVMVPERGQIRPAQEHEKTISPEPVV
LKPATHEAEWVQVATLGDIPRHAGMAARLGQQQIALFHLPGSEQQVYALENHEPGSGANV
LSRGLIGDVAGEAVVISPLYKKRFKLRDGVSPDDSALYVRAWPVRVEDDEIWVCRQPLAV
PESVGLADNDMAKAS
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcatctgatagtgattggcaacggaatggcgagcgcgcgattcgtcgatgcg
ctgcggcaactggccgcgacgcgctaccgaatcactgtgattggtgatgagccgcgcgcc
agctataaccgcatcctgttgtcaccggtattaagcggcgaaaaagcgtttacggatacg
ctgctgacgcctgcggctatcgacgatgatgcggcgctgccggtgaacactctgctgggt
gagcgggttacccatatcgatcgccaagcgcgtgaggtgacaacaacgcaacggcaactg
cattacgaccatctggtgctggcgacgggctcaacgccgtttatgccgccgatgcccggt
atcgatctagctggtgtgtgtggtttccgcacgctggatgatgttgaactgatgttggcg
acgattagccagtccgttcctgcggtagtgattggtggtggtttgctcggtattgaggcg
gctgcggcgctaagactgcgtggtgctgatgtgacgttgctgcatcgcgttccgattctg
atggagcgtcaactggatgccactgcgagcgacctgctgtgtgacagcctgtgcgcgcgc
ggtatcgcctgcgagacagatgtgcaggttgctgcactgcatggcgacgcacacggcgta
acggcagtcgaactggcagatggccgcacgatccccgccgggctggtggtggtgaccgct
ggcgtgatccctgccagccaactggctcgcgagtgcggcttgccctgcaaccgtggtgtg
ctggtggacggacagttgcaaaccgccgatccgcatatcagcgcgatcggtgaatgctgc
gaactcaatggcgaaacgttcgggctggtggctccgtgcttcgctcatgccacgctggtt
gcacagcgccttgctggacatgcaccgcaagactatcagcgtgaacaggcgacgacgcgg
ctgaaagtcacgggaattggcgtggtcagcggcggcgatattaatgttgctccgaatgat
gaggtgtacaccacgtttgatccgcagacgcagcactatcgccgtttgctactacgtgac
ggtcggctgagcggtgtcctgctttatggcgacactgacgacagcccgcgcctgctagcc
gcgatggataacacgactgaaggcgagatgatacagcctgccacgctgcttttcggcctt
tcttcccctgattctgactcacagcctgaagctgtaaggattcctgtcatgagcaaacct
attttagtggtcgtaggccacggtatggtcggccactattttcttgaacagctggttgag
cgtgacctgcaccagcattaccacatcgtggtatttggcaaagaacgccatgaagcctac
gaccgtgttcatctctccgagtatttttccgggcgtagcgctgcctcgttgtcattggta
aaagacggtttttttgccgagagcggcattgaattacgcagcgccagcgagatcgtggcg
atcgatcgtgaacgtcagtgcgtgtgtgacgcgcagggtagagaaaccgcctacgacaaa
ctggtgctggcaacggggtcctacgcatttgttccaccgattcctggcaatacgcgcccc
ggttgcctggtttatcgcacgttagacgatctggacgcgattgcggcacaggcgaaaaaa
gccacatccggcgtggtgattggcggcggtttgctgggactggaagccgccaacgccctg
cgtcagctggggctagatactcatgtggtggaatttgcaccacgcctgatggcggtacag
ctggatgacggtggtgcctcgatgctacgccgcaagatcgaggctctgggcgtacagatt
catgtcagtaaagaaacgcgtgaaattaccgacggcgagcaggcgttgcatcgtctctgc
tttgccgacggcagcgtgttggaaaccgatctggtgctgttttccgctggcattcgtccg
cgcgacaaactggcggatagctgtgatttagagaaaggcccacgtggcggtatcgtgatt
gatgaccgttgccaaacttccgacgacgcgattttcgctatcggcgagtgtgcgctgtgg
aaaggtcagatttttgggctggtagcaccgggctaccagatggcacgcagcgtggccgat
acgttagcgcagcgtgatacgccatttactggcgcagatatgagtaccaaattgaagctg
ctgggcgtggacgtcgcgtcgattggcgacgcgcacgggcgcacggcaggaagccaaagc
taccagtggacggatggtccgaacgaggtctacaagaaaatcgtggtgtctgccgacggc
aaacatttgctgggtgcggtactgattggtgacagcagcgattacagcacgctgctgcaa
atgatgctcaacgatatgccgttgcctaaacagccggaaggactgattttaccggcgcgt
tctggcgatgcaccgaaaggactgggcgtggcggtcttacccgccagcgcacagatctgt
tcctgccataacgtcagcaaaagcgacatctcagccgcagtggcgggtggctgcggcgag
ctgggggcgctaaaaacctgcaccaaggcggggacgggctgcggcggctgtgtgccactg
cttaaacaggtgatggagtacgaactgacgcaactgggcgtcgaagtgaagaaggacatt
tgcgagcactttgcctattcgcgtcaggaactgtatcacctgatccgcgtgcatgagatt
cgctcgttcgatggccttcttgagcgttacgggcatggtttaggttgtgaagtctgtaag
ccgctggtggggtcgatgctggcgtcctgttggaatgactacctgctacaaccgcagcac
ctgccgttgcaggataccaacgatcgtttctttgccaacatccagaaagatggcacctat
tccgtcgtgccgcgcgttcccgcaggggaaatcaccccggcagggctgatcgccatcggt
caggtcgcgcagcgctataacctgtacaccaagatcaccggtggccagcgggtggattta
ttcggtgcgcgattggaacagcttccggaaatctggcgtgagctaatcgacgccgggttt
gaaactggtcatgcctacggaaaatcactgcgtaccgtgaaatcctgcgtgggatcgacc
tggtgccgctacggcgtgcaggattcgaccgggctggcgatccaactggagcaccgttat
aaggggctgcgctcgccgcataaagtcaaaatggcggtttccggctgtacccgtgaatgt
gcggaggcacaaagcaaagatattggtgtgattgccacggacaaaggttggaatctgtac
gtgtgtggcaacggcggtatgaaaccgcgccatgcggatctttttgccagcgatctggat
accgaaaccctgctgcgcaccatcgatcgggtcttgatgttctatatccgcaccggcgat
cgcctccagcgtaccagcacctggatggataatctggaaggcggtatcgactatctgcgc
caggttattctggaagacagcctgaatattggcgaagagttagataaagagatgcagcgc
gtggtggaagcttatcagtgcgaatggcaaaccacgctggaaagcccagagcgtctggcg
ctgttccgtggattcctgaacagcgataacccagatgaagcagtcgtgatggtgccggag
cgtgggcagattcgtccggcgcaggaacatgaaaaaactatatcgccagagccggtagtc
ctgaaacctgccacgcatgaagcggaatgggtacaggtagcaacgctgggtgacattccg
cgtcatgccggaatggcggcccgtcttgggcagcagcagatcgcgctgttccacctaccg
ggcagcgagcagcaggtgtacgcgttagaaaaccacgaaccgggcagcggggcgaatgtg
ctgtcgcgtgggttgatcggtgatgtcgcgggtgaagccgtggtgatttctccgctgtac
aaaaagcgcttcaagctgcgggatggcgtcagcccggatgacagtgcgctgtacgttcgc
gcctggccagtgcgtgtggaagacgatgaaatctgggtatgccgtcaaccgctggccgtg
ccggaaagcgtcggtctggcagacaacgacatggcgaaagcatcatga
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