Pectobacterium peruviense: DUT67_10550
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Entry
DUT67_10550 CDS
T10302
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ppeu Pectobacterium peruviense
Pathway
ppeu00541
Biosynthesis of various nucleotide sugars
ppeu01100
Metabolic pathways
ppeu01250
Biosynthesis of nucleotide sugars
Module
ppeu_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ppeu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DUT67_10550 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppeu01005
]
DUT67_10550 (kdsA)
Enzymes [BR:
ppeu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
DUT67_10550 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
ppeu01005
]
Lipid A
DUT67_10550 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
XDF56782
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Position
2332519..2333373
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AA seq
284 aa
AA seq
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MTNKVVKIGDIPVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHESHQAQSVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFIEGGNDQVILCDRGSNFGYDNLVVD
MLGFNVMKHASNGSPVIFDVTHALQCRDPFGAASGGRRGQVTELARAGMAVGLAGLFIEA
HPDPANAKCDGPSALPLDKLEPFLQQIKAIDDLVKSFPELDTSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaagtggtcaagataggggatatccccgttgccaacgatttgccttttgtg
ctgtttggcggcatgaatgttcttgaatcacgcgatctggcgatgcgcatttgtgagcat
tacgtcacggtcacgcagaagttgggtattccttacgtgttcaaggcgtcattcgataag
gctaaccgttcttcgattcactcttaccgtggtcccggcttggaagaagggatgaaaatc
ttccaggagctgaaacagacctttggcgtaaaaattatcactgatgtacatgaatcacat
caggcgcagtccgttgccgatgtcgttgatgtgatccaacttcctgcatttttagcacgc
caaaccgatctggtagaagcgatggcgaaaaccggcgcagtgatcaacgttaaaaaaccg
cagttcgtcagcccaggtcagatgggaaacattgtcgataagtttatcgaaggtggcaac
gatcaggtgattctgtgcgatcgcggcagcaacttcggctacgacaatctggttgtggat
atgctgggcttcaatgtcatgaagcacgcttccaatggttcacctgtgatttttgacgtt
acgcatgcgctacagtgccgtgacccgttcggtgcagcgtccggtggccgtcgcggacag
gtaactgagctggcgcgtgctggtatggctgtcggtctggcggggctattcattgaagct
catcccgatccggctaacgcgaagtgtgatggtccatccgcgctgccgctggataaactg
gagccgttcttgcaacagatcaaagcgattgacgatctggtgaaaagcttcccagaactg
gataccagcaagtaa
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