Pectobacterium peruviense: DUT67_13325
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Entry
DUT67_13325 CDS
T10302
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ppeu Pectobacterium peruviense
Pathway
ppeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DUT67_13325 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppeu03019
]
DUT67_13325 (rhlE)
Enzymes [BR:
ppeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DUT67_13325 (rhlE)
Messenger RNA biogenesis [BR:
ppeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DUT67_13325 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
XDF53226
LinkDB
All DBs
Position
complement(2938102..2939553)
Genome browser
AA seq
483 aa
AA seq
DB search
MSFDSLGLSADILRAIDEQGYRDPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLTSREAQHKGKGRRPVRALILTPTRELAAQIDENVKAYSKYLSLRSLVVFGGVSINPQ
MMKLRGGVDILVATPGRLLDLEHQRAVDLSQIEILVLDEADRMLDMGFIHDIRRVLAKLP
AKRQNLLFSATFSDEIKALANKLLTNPASVEVVRRNSPSELVTQNVHFVDKRRKRELLSQ
LIGENNWQQVLVFTRTKHGANHLAELLEKDGITAAAIHGNKSQGARTRALANFKDGGIRV
LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAEATGEALSLVCVDEHKLLR
DIERLLKREIPRIAIEGYEPDPSIKAEPIVNGRQGSRGGGGGGARNSAPRAQSGAPRGQS
ERSDRSQGQGERRSADGNRQPRKAGGNSDSPWGTGGKGNGGKSSGEGQRRAPRPQNRSKP
ADK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggcctgagtgccgatattctgcgcgcgattgacgagcagggt
tatcgcgatcctactcctgttcaacgccaggcgattcctgtcgtgctggaagggcgcgat
ttaatggccagcgcccaaacgggtacgggtaaaaccgcaggttttacgttgccactattg
caactgttgaccagccgtgaagcgcagcataaagggaaaggtcgccgtccggtacgcgcg
ctgatcctgacgccaacccgtgaactggccgcgcagattgatgaaaatgtgaaggcgtat
agcaagtatctgagcctgcgttcactggtcgtcttcggtggggtgagcattaacccacag
atgatgaaactgcgtggcggcgtggacattttggtggcgacgccagggcgtctgctcgat
ctggagcaccagcgcgctgttgacctgtctcagatcgaaattctggtgctggatgaagca
gaccggatgctggatatgggcttcattcacgatattcgccgtgtactggcgaagctacct
gctaaacgccaaaacctgctgttctccgccactttctcggatgagatcaaagcgctggcg
aacaaactgctgaccaatccggcttcggtcgaagtcgtgcgtcgtaattcgccgtctgaa
ctggtcacgcagaatgtgcattttgttgataagcgccgcaagcgtgaactgctgtcgcag
ctgattggtgaaaataactggcagcaggtactggtctttacccgtaccaagcacggggct
aaccacttggctgagctgttggaaaaagacggtatcaccgctgcggctatccacggtaat
aaaagtcagggtgcgcgtactcgcgcgctggccaacttcaaggacggcggcatccgtgtg
ctggtcgcgacagatatcgccgcgcggggtctggatatcgaccagttgccgcacgtggtg
aactatgagctgccgaacgtgccagaagattacgttcaccgtatcggccgtaccggtcgt
gcggaagcaacgggtgaagcgctatcgctggtgtgtgtggatgaacacaaactgttgcgt
gacatcgaacgtctgctgaagcgtgagattccgcgtatcgctattgaaggttacgagccg
gatccgtccatcaaggccgagccgattgtgaatggtcgtcagggcagccgtggcggcggt
ggtggcggtgcgcgtaactcggcacctcgtgcgcagtctggcgcgccacgcggtcagtcc
gaacgcagcgatcgtagtcaaggtcagggcgaacgtcgttcagccgatggcaatcgccag
ccgcgtaaagcaggcggtaatagcgatagcccgtggggtactggcggaaaagggaatggc
ggtaagagcagtggcgaaggtcagcgccgcgcaccgcgtccacaaaaccgcagcaagcca
gcggacaagtaa
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