Pectobacterium peruviense: DUT67_13425
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Entry
DUT67_13425 CDS
T10302
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ppeu Pectobacterium peruviense
Pathway
ppeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DUT67_13425 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppeu03400
]
DUT67_13425 (uvrB)
DNA repair and recombination proteins [BR:
ppeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DUT67_13425 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DUT67_13425 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
XDF53244
LinkDB
All DBs
Position
complement(2958648..2960660)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKAFTLNSDFKPAGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MMLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDAIALRVELFDEEVERLSLFDPLTGHILQTVPR
YTIYPKTHYVTPRERILQAMEDIKVELADRKKVLLANNKLVEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPSNYELEKSGGDVIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRLRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLRGKAILYGDRITASMAKAISETERRREKQEAYNAEHGIVPQGINKKISDILQLG
QSANKGKGRGNRKAAEPAARYEMMTPKALELKIRELESNMLTHAQNLEFEEAAALRDEVQ
ALRAQFIAAS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcatttacactgaattccgattttaaaccagcaggcgatcagcctgaggcc
attcgtcgtttaaaggaaggtctggaagacgggttggcgcaccaaacgctgctcggggta
acaggctcaggtaagacgttcacgatagccaacgtgattgccgatctcaatcgaccgacg
atgatgctggcgcctaataaaacgctggcagcccaactgtacggcgaaatgaaagaattc
ttccccgataatgccgtcgagtacttcgtctcgtactacgactattatcagccggaggcc
tacgttccaagctcggacacctttatcgaaaaagatgcgtcggttaacgaacatatcgaa
cagatgcgtctttctgcgacaaaagcgctactggagcggcgcgatgtgatcgtcgtggcc
tcggtatccgctatctatggtctgggcgatcccgatctctatctgaaaatgatgctgcat
ctgacgcaggggatgttgatcgaccagcgtgccattttacggcgcttggctgaattgcaa
tatgcccgcaacgatcaggcgtttcagcgcggtaccttccgcgtgcgtggcgaagtgatc
gatatcttcccggcggaatctgacgcaatcgcgctgcgcgttgaattgttcgatgaagaa
gtggaacggctgtcgctgtttgacccgctgacgggtcatatcctccaaaccgtgccgcgc
tataccatctacccgaaaacgcactacgttacgccacgtgagcgtattttgcaggcgatg
gaagacatcaaggttgaactagccgatcgcaagaaggtactgctggcgaacaataagctg
gtggaagaacagcggctgagccagcgcacacagtttgatctggagatgatgaacgagctg
ggttactgctccggcatcgaaaactactcacgctatctttctggacgcggccccggcgaa
ccgccaccgacgctgtttgactatctaccagccgacgggctgctggtgattgatgaatcc
cacgttacggtgccccagatcggcggtatgtatcgcggcgaccgtgcgcgtaaagagacg
ctggtcgaatacggtttcaggctgccttccgcgctggataaccggccgatgaaatttgaa
gagtttgaagcgctggccccgcagacgatctatgtgtctgcgacgccaagcaactatgaa
ctggaaaaatcgggcggtgacgtcatcgatcaggtggttcgtcccaccgggttgctcgat
ccgatcattgaagtacgacctgtcgcgacacaggtggatgacctgctttccgagattcgc
ctgcgtgctgcgattaacgaacgagtgctggtgacgacgctgaccaagcggatggcggaa
gacctgacggaatatctggaagaacacggcgaacgggtacgttatctgcactcggatatt
gataccgtcgagcgtgtggaaattatccgcgatttgcgcctgggtgaattcgacgtgctg
gttggcatcaacttgctgcgtgaagggctggatatgcctgaagtgtcgctggtggcgatt
ctggatgccgacaaagagggcttcttgcgctccgaacgctccttgatccagacgattggc
cgcgcggcgcgtaatttacgcggcaaagctattctttacggcgacagaattacggcatcg
atggcgaaagcgattagcgaaacggaacgccgccgcgagaagcaggaagcctacaatgcg
gaacacgggattgtaccgcaggggatcaataagaagatttccgatattctgcaattggga
cagtctgcgaacaaaggcaaagggcgaggcaatcgtaaagcggcagaaccggcagcgcgt
tatgaaatgatgacgccgaaggcgctggaactgaaaattcgcgagctggaaagcaatatg
ttgacgcatgcgcagaatcttgaatttgaagaggctgcggccctgcgcgatgaagtgcag
gcattacgcgcacaatttatcgctgcatcctag
DBGET
integrated database retrieval system
