Pectobacterium peruviense: DUT67_17250
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Entry
DUT67_17250 CDS
T10302
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ppeu Pectobacterium peruviense
Pathway
ppeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DUT67_17250 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppeu03400
]
DUT67_17250 (recB)
Enzymes [BR:
ppeu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DUT67_17250 (recB)
DNA repair and recombination proteins [BR:
ppeu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DUT67_17250 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
ResIII
BARF1_ig2
Motif
Other DBs
NCBI-ProteinID:
XDF53938
LinkDB
All DBs
Position
complement(3822232..3825858)
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AA seq
1208 aa
AA seq
DB search
MKNAAPQSLDVMTLPLLGERLIEASAGTGKTYTLAALYLRLLLGLGKQAAYPRPLLVEEI
LVVTFTEAATEELRERIRARIHALRIACLRKSAQGDTAQEPKDTSLAQLLAEISDHREAA
DVLLAAERQMDEAAIYTIHGFCQRMLSTNAFESGVLFEQVLIEDEQPLRRQACADFWRRY
CYPLPVEVARIVGLEWKGPENLLADLAPYLHGEAPAFRLPPEEDETLLSRHEKIVATIDA
YKQRWLASASDLEALISASGVDKRSYSSKHLPNWLQKVTLWAEQPTLDYQLPKDLVRFAQ
QTLIEKTKKGEPPVHAIFEVTERLLETPLSLRDLVIVRALSAIRDSVREEKRQRAELGFD
DLLSRLDDALQQPSGEQLASAIRERYPVAMIDEFQDTDPQQYRIFRTLYVGQPQCGLLLI
GDPKQAIYAFRGADIFTYMHARGEVAAHYTLGTNWRSSHQMVRGVNRLFERIEHPFIFHN
IPFLPVNPAESKRGLVFDIAGQPQPALQFWLTGEEPIGVGDYQQQMARQCAAQIRDWLAA
SQRNEAWLVTDDSRRLVKASDMSVLVRSRREASLIRDALSRLSIPSVYLSNRDSVFTTPE
ASDMLWLLQAVLAPEQERTLRSAMATVLMGLDAEQVDALGQSETAWDALVDEFAGYHALW
RQRGVLPMLRALMSHHQLAENLLASAEGERRITDILHIGELLQDASATLDSEHALVRWLS
QQIVQPNPQAENQQLRLESDRHLVQIVTIHKSKGLEYPLVWLPFISNFRVQDQGIYHDRD
SYQAVLDLQNNEESQTLAEEERLAEDLRLLYVALTRSIYHCSVGVAPVQRSRKKDGSSDM
HHSALGYLLQRGQEADVATLVSELKEMVGDGVALTPLQTTEAQRWQPDQPELAELQARHI
ERQLRDGWRVTSYSGLQQHGSANAQDLVPRLDIEAIGERQEVGETQLTPHTFPRGASPGT
FLHSLFETLDFTQPVDDDWLAEQLQLQGFEAHWHPVLKAWMDTLLNTPLNEQGITLSALD
NSDKQAELQFYIPIKAPIQAAQLDRLAKHYDPLSAQCPALSFQQVKGMLKGFIDLVFRWE
GRYYLLDYKSNWLGPDASAYTQTAMAQSMAEHRYDLQYQLYTLALHRYLRHRIADYDYER
HFGGVFYLFLRGVEDSHPGNGIFAFRPSAEFVFGLDALFEGDFFNGDVFNDDVFGGKAPD
DADTGVSS
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgccgcgccgcaatcattagacgtcatgacgttgccgctcttaggagagcgg
ctgattgaggcgtcggctggaacggggaaaacctatacgctggctgcgctctatctacgt
ctgctgttggggctgggtaagcaagccgcgtatccacggccgttactggtcgaagaaatt
ctggttgtgacctttacggaggccgcgaccgaagagctacgcgaacgtatccgtgccaga
attcacgcgttgcgcatcgcctgtctgcgtaaaagtgcgcagggtgacacggcgcaggaa
cctaaggatacctcgctagcacaactgctggcggagatttcagatcatcgtgaggccgcc
gatgtattgctggcagctgaacggcaaatggatgaagcggcgatctacacgatccacggt
ttctgccaacgtatgctcagtaccaatgcgtttgaatccggcgtgctttttgaacaggta
ctgatagaagatgaacagccgttgcgccgtcaggcctgtgccgatttctggcgtcgttat
tgttatccgctgccggtagaagttgcgcgtattgtcggtctggagtggaaagggccggag
aatttgctggccgatctggcgccttatctgcacggtgaagcgcctgcgtttcgcctgccg
ccagaagaggacgaaacgttgctgagtcgacatgagaaaatcgtggcgaccatcgatgct
tacaaacaacgctggctggcgtcagcatcggatttggaagcgctgattagtgcttctggc
gttgataagcgcagctatagcagcaagcatcttcccaactggctacagaaagtcacactg
tgggccgagcagccaacgttggattatcaattgccgaaagatctggtgaggtttgcccag
caaacgttaatcgagaagacgaagaaaggcgaaccgcccgttcatgccatctttgaggta
acagagcgactgctggaaacgccactatcgctgcgtgatttggtcattgtacgtgcgctg
tcggcaatccgagattctgtgcgtgaagaaaaacggcagcgtgcggaactggggtttgac
gatctgctgagccgtctggatgacgcattgcaacagccgagtggggagcaacttgccagc
gccattcgtgagcgttatccggtggcaatgatcgatgagtttcaggataccgatccccaa
caatatcgtatttttcgcacgctttatgtcggtcagccgcagtgtgggctattgctgatc
ggtgaccctaagcaggctatttatgcatttcgcggtgcggatatttttacttacatgcac
gcgcgtggagaagtggccgcacattatacgctgggcacgaactggcgttcgtcgcaccag
atggtgcgcggtgttaatcgtctttttgaacgtattgagcacccttttatttttcacaac
atcccttttttaccggtcaatcctgcggaatctaagcgcggtttggtgtttgacatcgcc
ggacagcctcagcctgcgctgcaattctggctaacgggtgaagaaccgattggcgtcggg
gattatcagcagcagatggcgcgccagtgtgcggcacagattcgcgactggctggcggcc
agccagcgcaatgaggcctggttggtaaccgatgattcccggcgtttggtcaaagcctct
gacatgagcgtactggtgcgtagccgacgtgaagcgtcgctgattcgcgatgcgctgagc
cgtttgtccattccctcggtgtacctgtccaatcgcgatagcgtgttcactacgcctgaa
gccagcgatatgttgtggctactgcaggcggtgttggcacccgagcaggagcgcacgtta
cgcagcgccatggcgacggttctaatggggctggatgccgaacaggttgatgccttaggg
caaagcgaaaccgcgtgggatgcgctggtggatgagtttgctggctaccatgcgctgtgg
cgtcaacgtggtgtattgccaatgctgcgtgcgctgatgagccaccatcaactggcggag
aacctgctggcgagcgcagagggagaacgccgtattaccgatattttgcatatcggtgaa
ttattgcaggatgcctcggcaacgctcgacagtgaacacgcactggtgcgctggctatca
caacagattgtccagcctaatccgcaggcagaaaaccaacagctgcgtctggaaagcgac
cgccatctggtgcagatcgtgacgatccataaatcgaaagggctggagtatccactggtg
tggctacctttcatcagcaatttccgcgtgcaggatcagggaatttatcacgatcgcgat
agctatcaggctgtgttagatctgcaaaataatgaagaaagccagacgttggcggaagaa
gagcggttagcagaagatttacgtttgctgtatgtcgcactaacccgttctatctaccac
tgtagcgttggcgtcgcgcccgttcagcggtcgcgtaagaaagatggcagcagtgatatg
caccacagtgcgctgggctatttgctccagcggggtcaagaggcggatgttgccaccttg
gtcagcgagcttaaggaaatggtgggcgacggtgttgcattgactccgttacagacaacg
gaagcgcagcgctggcaaccggatcaacccgaattggcagaattgcaggctcgtcatatt
gagcgccaactacgcgacggctggcgagtgaccagctattcggggcttcagcaacacggt
tcagcaaacgcgcaggatctggtgccgcgtctggacattgaagcgataggtgaacgtcag
gaagtaggggaaacccaattgacgccgcatacgttcccgcgcggcgcgagtccggggacg
tttttgcatagcctgtttgaaacgctggattttacccaacctgttgatgatgactggctg
gctgaacagttgcagcttcaggggtttgaagcgcactggcacccggtgttgaaggcgtgg
atggatacgcttttgaatacgccgcttaacgagcaaggaattacgctatcggcgctggat
aattcggataagcaggctgaactacagttctatataccgattaaggcaccgatacaggca
gcgcagcttgatcggttggcaaagcactacgacccgctatccgcacagtgtccggcgctc
tcttttcagcaggttaaaggcatgctgaaagggtttatcgatctggtctttcgctgggaa
ggacgttactacctgctggactataaatccaactggcttggtcctgatgccagtgcctac
acccagactgccatggctcagtcgatggccgagcaccgctatgacttgcaatatcagctt
tacacgttggctctgcatcgctatctgcgtcatcgcattgcggattatgactatgagcgc
cactttggtggcgtgttttatctgtttttacgcggcgtcgaggattctcatcccggtaat
ggcatctttgcttttcgtccttctgctgaatttgttttcgggcttgatgcgttgttcgaa
ggcgattttttcaacggtgacgtgttcaacgatgatgtgtttgggggaaaggcacctgat
gatgctgacacaggagtttcgtcatga
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