Pectobacterium peruviense: DUT67_19025
Help
Entry
DUT67_19025 CDS
T10302
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ppeu Pectobacterium peruviense
Pathway
ppeu02040
Flagellar assembly
Brite
Transcription machinery [BR:
ppeu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DUT67_19025 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDF54259
LinkDB
All DBs
Position
4231717..4233552
Genome browser
AA seq
611 aa
AA seq
DB search
MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIIDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAENTNDADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGESRLSDLIIGFVDPNAEEDIAPTA
THVGSELSSEEINDDDEEEDEEEEEDDNSIDPELAREKFTELREQYETTRQVIKAHGRSH
ALAAQEILNLSEVFKQFRLVPKQFDFLVNSMRSMMDRVRTQERLIIKLCVEQCKMPKKNF
VTMFTGNETNNSWFAAAVAMGKPWSEKLNDVEEDVTRSLQKLQQIEEETGLTIEQVKDIN
RRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYR
RGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEE
LAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLRS
ATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPS
RSEVLRSFLDD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaagctgcttgttacccgtggtaaggagcaaggc
tacctgacctatgctgaggtcaatgaccatctgccggaagatatcatcgactcggatcag
atcgaagatatcatccagatgattaacgacatgggcatccaggtgatggaagaagcaccg
gatgctgacgatctgttgctagccgaaaacaccaatgatgccgatgaagatgcggcagag
gctgctgcgcaggttctatccagtgttgaatcggaaattggtcgcaccaccgatccggtt
cgcatgtacatgcgtgaaatgggtaccgttgaactgttgacgcgtgaaggcgagatcgat
atcgccaagcgtattgaagacggtatcaatcaggttcagtgctctgtcgcggagtatcct
gaagccattacctatctgctggaacaatacgatcgtgtcgaagccggcgaaagccgcctg
tccgatctgatcatcggtttcgtcgatcctaatgcggaagaggacattgcccctaccgcg
actcacgtcggttccgagctttcgagcgaagaaataaacgatgacgacgaggaagaagac
gaggaagaagaagaagacgataacagcatcgatcctgagctggcacgtgagaagttcacc
gaactgcgtgagcagtatgaaacgactcgccaggtgataaaagcccacggtcgtagccat
gcgctggcagcacaggaaatcctgaatctgtctgaagtcttcaaacagttccgtctggtg
ccgaaacagtttgatttcctggttaacagcatgcgttccatgatggatcgcgtccgtact
caggaacgtttgatcattaagttgtgcgttgaacagtgcaaaatgccgaagaaaaacttc
gtcacgatgttcactggcaatgaaaccaacaacagctggtttgccgcagcagtagcgatg
ggcaaaccttggtctgaaaaactgaatgatgttgaagaagacgtcacccgcagcctgcaa
aaactgcaacagatcgaagaagaaaccggtctgacgatcgagcaagttaaagacatcaac
cgccgtatgtcgattggtgaagcgaaagctcgccgcgccaagaaagaaatggtggaggcc
aacctgcgtttggttatttctatcgcgaagaaatacaccaaccgtggtttgcagttcctc
gatctgattcaggaaggtaacatcggtctgatgaaagcggtagataagttcgaatatcgc
cgtggttacaaattctcgacctatgcgacctggtggatccgtcaagcgatcacccgttct
atcgccgatcaggcgcgtactatccgtattccggtacacatgattgagacgatcaacaaa
ctgaatcgtatctctcgtcagatgttgcaggaaatgggtcgcgagccaacgccggaagag
ctggctgaacgtatgttgatgccagaagacaagatccgcaaagtgctgaagatcgcgaaa
gagccgatttcaatggaaaccccgattggtgatgatgaagattcacatttgggcgatttc
atcgaagatacgacgctggagctgccgctggattccgcgacgtcggaaagcctgcgttct
gcgacacacgacgtactggctggcctgactgcgcgtgaagcgaaagtcctgcgcatgcgt
ttcggtatcgatatgaacaccgaccatacgctggaagaagtgggcaaacagtttgacgtt
acccgtgagcgtattcgccagatcgaagcgaaagcgctgcgtaaactgcgccacccaagc
cgttccgaagtgctgcgtagcttcctggatgattaa
DBGET
integrated database retrieval system
