Pectobacterium peruviense: DUT67_20180
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Entry
DUT67_20180 CDS
T10302
Name
(GenBank) transcription antiterminator
Organism
ppeu Pectobacterium peruviense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRD
HTH_11
Mga
HTH_DeoR
PuR_N
HTH_Mga
PTS_IIB
HTH_17
GerE
HTH_6
AbiEi_4
SpoIIID
HTH_Tnp_ISL3
HTH_29
HTH_22
HTH_Tnp_1_2
Terminase_5
HTH_5
Sigma70_ECF
TetR_N
TrmB
HTH_7
HTH_23
Motif
Other DBs
NCBI-ProteinID:
XDF54475
LinkDB
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Position
4488046..4489596
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AA seq
516 aa
AA seq
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MMQPLTSRQNRLLKYLLQHQGYVTVKDIAHYLDVSEKTVYRDMQFVEAFLSVWNIYPDKK
VGAGIMLTTDDDRHIMLLEQQLVVDDGETDALINNARRVKIASQLLSDTPHETSISKLSE
RYFISSASIVNDLKIIESWLHPLGLSLVRSQSGTHIEGSENQVRQAMASLINDVMHHKEP
GSLSHSRLDPGSYRALINYFGENDVSFVEALLQDMEKSLSYPLGEPYYINIFTHTLIMMH
RIAQGKALIMAEDAVHQQVDNRIFSIAQNMVTQIEQRVENTLPSDEVWFIYQYIISSGIV
MEERADNQLLRYQFSNGESRRITRALTQVFSDLINIDLRTDKLLHEGLLIHIKPLLNRLK
YQIHIRNPLLDDIKIEFIDIYEMTQQAMNEVCLRFQLNPVAEDEVGYLTIHFQAALERQI
AHKRILVVCSSGVGTSHLLKNRILRAFPDWIIVGVISASNMQVFCQQEDIELIISTIHLE
EQLIPVVYVSAFFNDDDIKRVTERVIANQLHQAVPH
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagccactcacctcccgccagaaccgtttattgaaatatctgctacaacaccag
ggatatgtaacggttaaagatattgcacattatctggatgtgtcggaaaaaaccgtctat
cgcgatatgcaatttgttgaagccttcctttctgtctggaatatttatccagacaaaaag
gtcggtgcgggaattatgttaacaacggatgacgaccgacacatcatgttgctggaacag
caacttgtcgtggatgatggggagaccgatgcgctgatcaacaatgctcgccgcgtcaaa
atcgcctcacaattattaagcgacacgcctcatgaaacctccatcagcaaactgtcagaa
cgctactttatcagtagtgcgtctatcgttaacgatctgaaaatcatcgaaagctggcta
catccactgggattatcgctggtgcgcagccagagcggcacacacattgaaggcagcgag
aatcaggtgcgtcaggcgatggcttcgcttattaatgacgttatgcatcataaagagccc
ggctcacttagccactcgcgcctcgaccccggtagctatagggcactgattaactatttc
ggcgaaaacgacgtttccttcgtcgaagcgctgttacaagacatggagaaatcgctttct
tatccgctaggcgagccttattacatcaatattttcacccatacgttaattatgatgcac
cgcattgcgcagggaaaagcgctcatcatggcggaagacgctgttcatcagcaggttgat
aatcgcatattctccatcgctcaaaatatggtgacccaaatagagcaacgcgtcgagaac
acgctaccttccgatgaagtctggtttatttaccaatatattatttcttcaggcattgtg
atggaagagcgtgcggataaccaactgctccgctaccaattttctaatggtgagtcccgc
agaattacacgtgcattaacacaggtattttctgatttaatcaatatcgacttgcgtacg
gataagttattacatgaaggattgcttattcatatcaagccgttgcttaaccgattaaag
tatcaaatacacattcgaaatccattattagacgatatcaaaatcgaatttatcgatatt
tatgaaatgactcagcaagccatgaatgaagtctgtctgcgatttcaattaaatcccgtc
gctgaggatgaagtcggctatttgaccattcattttcaagccgcgctggaacgccaaatt
gctcataaacgtattttggttgtgtgctccagcggcgtgggaacgtcacatttgctaaaa
aaccgtattctgcgtgcatttcctgactggattattgttggcgtgatatcagccagtaat
atgcaggtattctgccagcaggaagacattgaattgattatttctacgattcatctggaa
gagcaactgattccggttgtttatgtatccgccttttttaatgacgatgacattaaacgt
gttaccgaaagagttatcgctaatcaactacatcaagccgtccctcactga
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