Pectobacterium peruviense: DUT67_20605
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Entry
DUT67_20605 CDS
T10302
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
ppeu Pectobacterium peruviense
Brite
Messenger RNA biogenesis [BR:
ppeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DUT67_20605 (csrD)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDF54556
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Position
complement(4575690..4577627)
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AA seq
645 aa
AA seq
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MGFTTRFSILIVLLTVLAIFLMLFSSIFSLCYYSQLRTEQQLREVTASIDQALLVQSPEN
IQYWLPGMMKTAGIVALEIQDNDSPLYSIQLPEASWERTHLYHEVEFPLMHHMNMEIALK
YVDPLIGLPRFVVSTLSVLLAAGLMLLMLYFSIRWLRHQAAGQEELEKRAQRILKGERES
VMQGSVREWPVNTSGALDQLLSDLVEAREERGRVDTLIRAFAAQDAETGLSNRLFFDNQL
TTQLEDGEEVGTHGIVMMIRVPDFETLQETHGCSGVLQEYRFTLVNLLSTFVMRYPSALL
ARYFSSDFTVLLPHSTLKEANAIATQLVKAIDILPACPLIDREEVLHIGICAYRGGQSAE
QVMESVEDATRNAVLQGGNSWCVFDRQVPDKSRGSVKWRTLLEQTLARGGPRLYQKPAVT
KEGVVHHREMMSRIYDGEQELLAAEYMPLVQQLGLATSYDRQLVARIVDLSASWPGETLA
LPVSVDSLLQKPFLRWLKEILLQCPKTQRQCILFELAEADVCQYIGRLRPVLNLILGLGC
RLAVTQAGLTLVSTTYIKSLPVEIIKLHPGLVRSLERRPENQLFVQSLTEACKGTQTRVF
AAGVRTKEEWRMLLGKGVYGGQGDFFATSVLVTDELKKYSPRHRV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgggatttacgaccagattctcgatactcatagtattgctgacggttctggcaattttt
cttatgcttttcagtagcatatttagcctctgttattatagccagttgcggaccgagcaa
cagctgcgtgaggtcacggccagtatcgatcaggcattattagtgcaatcgcccgaaaac
atccaatattggctgccgggaatgatgaaaacggcaggcattgtcgcgctggagattcag
gataacgattcgccgctctactcaatacaactgcccgaggccagttgggaacgcacgcac
ctctaccatgaggtcgaattcccgctgatgcaccatatgaatatggagatcgccttaaaa
tatgtcgatccgctgattggtttaccacgcttcgtggtgtcgacgttgtcagtgttgctg
gcggcgggactaatgctcctgatgctgtacttctccatccgctggttacgtcatcaggcc
gccggacaggaagagttggaaaagcgcgcacagcgtattctcaaaggcgaacgtgaatcg
gttatgcaggggtcggtacgtgaatggccggtcaataccagcggagcactcgatcagctg
ttgtccgatttagtggaagcgcgagaagagcgtgggcgggttgataccttaatccgtgct
ttcgctgcgcaggatgctgagactgggctgagtaaccgtctgttttttgataaccaattg
accactcagttggaagatggcgaagaggtggggacgcacggcatcgttatgatgatccgt
gtgccagattttgaaacgttgcaggaaacgcacggttgcagcggcgtgcttcaggaatac
cgttttacgctggttaacctgctgtcgacatttgtcatgcgctatccctctgcgctgctg
gcgcgttatttcagcagcgatttcaccgtattactccctcacagtacgctaaaagaagcc
aatgcgattgccacgcagttggtgaaagctattgatattcttcctgcctgcccgctgatc
gaccgggaggaggttctccacattggcatctgtgcctatcgtggcgggcaaagcgctgag
caggtgatggaaagtgtggaagacgcgacgcgcaatgcggtattgcagggcggtaacagc
tggtgcgtgtttgacaggcaggtgccagataagagccgcggcagtgtgaaatggcggacc
ttgctggaacaaacattggcgcgtggcggcccgcgactgtaccaaaagcctgcggtcaca
aaagagggcgttgtacatcatcgtgaaatgatgagccggatttatgacggagaacaggaa
ctgctcgcggcggagtatatgccgctggttcaacagttggggctggcaaccagctatgat
cggcagctagttgcacgaattgttgatttgtcagcgagctggcccggagaaacactggct
ttaccggtaagtgtggactcacttttgcaaaaaccttttttgcgttggctgaaagaaata
ttgctgcaatgtccgaaaacgcagcgacagtgcattttatttgaacttgcagaggcagat
gtttgtcaatatatcggccgtctgcgcccggttctcaatttgatcctgggattaggctgt
cgtctggctgttacacaggcaggcttgacgctggtcagcacgacatatatcaagtcactt
cccgtggagatcatcaagcttcatcccggtttggtgcgcagccttgaacgccgtccagaa
aatcagctttttgtacaaagcctgaccgaggcgtgtaaaggaacgcaaacgcgggtgttt
gccgcgggagtgcgtaccaaagaggagtggcggatgctattgggcaagggcgtttatggt
gggcaaggcgatttttttgccacatcagtccttgtaacggatgagctgaaaaaatattca
ccgcggcatcgtgtttag
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