Pectobacterium peruviense: DUT67_20855
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Entry
DUT67_20855 CDS
T10302
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ppeu Pectobacterium peruviense
Pathway
ppeu03020
RNA polymerase
Brite
Enzymes [BR:
ppeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DUT67_20855 (rpoC)
Transcription machinery [BR:
ppeu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DUT67_20855 (rpoC)
DNA repair and recombination proteins [BR:
ppeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DUT67_20855 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDF54600
LinkDB
All DBs
Position
complement(4625822..4630045)
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVVEGGMTNLERRQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKNMDLEQECEQLREELTETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERVYRAG
LASLHARVKVRITEEIKSIEGDVTHQTSIIDTTIGRAILWMIVPKGLPYSIVNQPLGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPAKKAEIIEEAETE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSVEDVVNRDGVVEQQVSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRERVL
GRVTAEDVIKPGTADILVPRNTLLNEQWCDMLEENSVDVVKVRSVVSCQTDFGVCANCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSLKL
NNVKFVMNGNGKLVITSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGSEVSGGETVANW
DPHTMPVVTEVSGFIRFADMIDGQTITRQTDELTGLSSIVVLDSAERTGSGKDLRPALKI
VDAKGEDVLIPGTDMPAQYFLPGKTIVQLEDGVQIGAGDTLARLPQESSGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVISPLDGSDAYEEMIPKWRQLNVFE
GEVVERGDVVSDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKGTIVSAGSTEFLEGEQAEMSRIKIANRKLEADGKITATFSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRQAGEAPV
VPQVSADEASANLAELLNAGFGSSDDE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcctcgccagacatgatccgttcgtggtcttttggtgaagttaaaaag
ccagaaaccatcaactaccgtacgttcaaacctgagcgtgacggtcttttctgcgcccgt
atctttgggccagtaaaagattatgagtgcttgtgcggtaagtataagcgcctgaaacac
cgcggtgttatttgtgagaagtgcggcgttgaagtaacccagactaaagtacgtcgtgag
cgtatgggtcacatcgagctggcttctccgactgcgcacatctggttcctgaagtcactg
ccttcccgtatcggtttgctgttagatatgccgctgcgtgacattgagcgtgtgctttat
tttgaatcttatgtcgtggttgaaggtgggatgaccaaccttgagcgccgtcagatcctg
actgaagagcagtatctggatgcgctggaagagtttggtgacgaattcgacgcgaaaatg
ggcgccgaagcgatccaggctctgctgaagaatatggatctggagcaggaatgcgagcag
ctgcgtgaagagctgaccgaaaccaactccgaaaccaaacgtaaaaagctgacgaagcgt
attaagctgctggaagcgttcgtacagtctggtaacaagccagagtggatgatcctgact
gttctgccggtactgccgccagatctgcgtccgttggttccattggatggtggtcgtttc
gcgacttccgatctgaacgatctgtaccgtcgcgtgattaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcgccagacatcatcgtacgtaacgaaaaacgtatgttgcag
gaagcggttgatgccttgctggacaacggccgtcgcggtcgtgcgatcaccggttctaac
aaacgtcctctgaaatctttggccgatatgatcaaaggtaaacagggtcgtttccgtcag
aacctactcggtaagcgtgttgactactctggtcgttccgtaatcaccgttggtccatac
ctgcgtctgcaccagtgtggtctgccgaagaaaatggcactggaactgttcaaaccgttc
atctacggcaagctggaactgcgtggtcttgctaccaccattaaagccgccaagaaaatg
gttgagcgtgaagaagccgtcgtatgggatatcctagacgaagtcattcgcgaacaccca
gtactgctgaaccgtgcgccaacacttcaccgtttgggtatccaggcatttgaaccggta
ctgatcgaaggtaaagcgatccagctgcacccgctggtttgtgcggcatataacgccgac
ttcgatggtgaccagatggctgtacacgtaccgctgacgctggaagcccagttggaagcg
cgtgcgttgatgatgtcgaccaacaacatcctgtcccctgcgaatggtgagccaatcatc
gttccttctcaggacgtggtattgggtctgtattacatgacgcgtgactgtgttaacgcc
aaaggcgaaggcatggtgctcacgggtccgaaagaagctgaacgcgtttatcgtgctggc
cttgcctctctgcatgcgcgcgttaaagtgcgtatcacggaagagatcaagagcatcgaa
ggcgatgttacgcatcagacgtcaattattgatacgactatcggccgcgccatcctgtgg
atgatcgtaccgaaaggtctgccgtactcgatcgttaaccagcctctgggcaagaaagcg
atctccaaaatgcttaacacctgttaccgcattttgggtctgaagccgacggttatcttc
gctgaccagactatgtataccggttttgcttacgcggcgcgctctggtgcttccgtaggt
atcgatgacatggttatcccagcgaaaaaagccgagattatcgaagaagcagaaaccgaa
gttgccgagattcaggagcagttccagtctggtctggttaccgcgggcgaacgctataac
aaagtgatcgatatctgggcagcggcgaacgaacgtgttgcgaaagcgatgatggaaaac
ctgtccgttgaggatgtggttaaccgtgatggcgtggttgagcagcaggtttctttcaac
agcatctttatgatggccgactccggtgcgcgtggttctgcggcacagattcgtcagttg
gcgggtatgcgtggtctgatggcgaaaccagatggttccatcatcgagacaccgattacc
gcaaacttccgtgaaggtttgaacgtactccagtacttcatctcgacgcacggtgcgcgt
aaaggtctggcggatactgcactgaaaacggcaaactccggttacttgacgcgtcgtctg
gttgacgttgcgcaggatctggttgttaccgaggacgattgtggtacccatgaaggtatc
atgatgacgccggttatcgagggtggtgatgttaaagagccactgcgtgagcgcgtactg
ggtcgtgtaacggctgaagacgtgatcaaaccgggcaccgcggatattctggttccacgt
aacacgctgctgaacgagcagtggtgtgacatgttggaagagaactctgttgacgttgtt
aaagtccgttcagtggtaagctgccaaaccgactttggcgtgtgcgccaattgctacggt
cgcgatctggctcgtggtcatatcatcaacaaaggtgaggccatcggggttatcgcggca
cagtccatcggtgaaccgggtacacagttaaccatgcgtacgttccacatcggtggtgcg
gcatcgcgtgcggctgctgagtccagcattcaggtgaaaaataaaggtagcctgaaactg
aacaacgtgaagttcgttatgaacggcaacggtaaactggttattacttcacgtaatacc
gaactgaagctgatcgacgaattcggacgtactaaagaaagctataaagtgccttacggt
gcggtgatggcgaaaggtgacggctcagaagttagcggcggtgaaaccgtagcaaactgg
gatccgcataccatgcctgtggtgaccgaagtgagcggtttcatccgttttgctgacatg
attgacggtcaaaccattacccgccagaccgacgaactgactggtttgtcttctatcgtg
gttctggatagcgcagagcgtactggtagcggtaaagacctgcgtccagcactgaaaatt
gttgatgctaaaggtgaagatgtactgatcccaggtaccgatatgcctgctcaatacttc
ctgccgggtaaaacaattgttcagttggaagatggggtgcagattggtgctggtgataca
ttggcgcgtctccctcaggaatccagtggtaccaaggatattaccggtggtctgccacgc
gtagccgacctgttcgaagctcgtcgtccgaaagaaccggcgattctggcagagatcagc
ggcatcatttccttcggtaaagaaaccaaaggcaagcgccgtctggtgatttctccgttg
gatggcagcgatgcttacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaa
ggtgaagttgtggaacgtggtgacgttgtttccgacggcccagagtctccgcacgatatc
ctgcgtctgcgtggcgtacatgcagtaacgcgttatatcaccaacgaagttcaggaagtt
taccgtctgcaaggcgttaagattaacgataaacacattgaggttatcgttcgtcagatg
ttgcgtaaaggcaccatcgttagcgcgggtagtacggagttcctggaaggcgagcaggca
gaaatgtctcgcatcaagattgccaaccgtaagttggaagcggatggcaagatcacggca
acgttcagccgcgatctgctaggtatcaccaaagcatctctggcgaccgagtccttcatt
tctgcggcatcgttccaggaaaccactcgcgtgcttaccgaagctgctgttgcgggtaaa
cgtgatgagctgcgtggcctgaaagagaacgttatcgtaggtcgtctgatcccagcgggt
acgggttatgcgtaccatcaggatcgtatgcgccgccgtcaggcgggtgaagctcctgtc
gtgcctcaggtgagtgccgatgaagcttctgctaacctggctgagctgttgaacgcaggc
tttggtagcagcgacgacgaataa
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integrated database retrieval system
