Pseudomonas putida F1: Pput_0181
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Entry
Pput_0181 CDS
T00537
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppf
Pseudomonas putida F1
Pathway
ppf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pput_0181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppf03021
]
Pput_0181
Transcription machinery [BR:
ppf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pput_0181
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
PhyR_sigma-like
HTH_23
Sigma70_r4
GerE
HTH_29
HTH_11
HTH_Tnp_ISL3
HTH_24
HTH_40
HTH_7
HTH_28
MPAB_Lcp_cat
HTH_36
PapC_N
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ABQ76356
LinkDB
All DBs
Position
complement(193925..194446)
Genome browser
AA seq
173 aa
AA seq
DB search
MPAPSSMPSNDSVQTLYSDHHGWLHTWLRSKLGNAADAADLAQDTFVRLLQRREQLQLNA
PRAFLRTVARGLVIDHWRREELHRAYLEALAHVPEALAPSVETRELLLELLERIARMLDG
LKPKVRRAFLLAQCEGLKHQAIAEQMGISVRTVERYIADALYHCYVLRYEDDC
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgccctcctccatgcccagcaacgattccgtgcaaacgctctacagtgaccac
cacggctggttgcatacctggctgcgtagcaagctcggcaacgcagccgatgcggctgac
ctcgcccaagataccttcgtccgcttgctacagcgtcgtgaacaattgcagctgaatgct
cccagggccttcctgcgcacggtagcgcgtgggttggtgatcgatcattggcgccgcgag
gaactgcacagggcctacctggaggctttggcccatgtgccggaagcactggccccctca
gtcgagacccgcgagctgctgctggaattgcttgagcgtattgcacgcatgctcgacggc
ctcaaacccaaggtccgtcgcgcattcctgctggctcaatgcgaggggctgaagcatcag
gccatcgccgaacagatggggatctccgtgcgcaccgttgagcgctatatcgccgatgcg
ctctatcactgctacgtgctgcgctatgaagacgactgctga
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