Pseudomonas putida F1: Pput_0379
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Entry
Pput_0379 CDS
T00537
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf03030
DNA replication
ppf03430
Mismatch repair
ppf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pput_0379
03430 Mismatch repair
Pput_0379
03440 Homologous recombination
Pput_0379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppf03032
]
Pput_0379
03400 DNA repair and recombination proteins [BR:
ppf03400
]
Pput_0379
Enzymes [BR:
ppf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pput_0379
DNA replication proteins [BR:
ppf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pput_0379
DNA repair and recombination proteins [BR:
ppf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pput_0379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABQ76552
UniProt:
A5VXE2
LinkDB
All DBs
Position
complement(439553..440263)
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AA seq
236 aa
AA seq
DB search
MSLFAWLRPSAPELDHAKRQRLARLPKPVPLGVCTLREQRWVVLDLETSGLNPNRDQVLS
IGAVAIEDGAIDFAQQFERTLHRPLQKTNASVLIHGLGPSALAAGCDPAEALLDLLDFIG
NSPVLAFHAPFDQRMLARALKETLGHRLQSMFLDVAELAPMLNPDTVLREAGLDDWVARF
GLQVEERHHASADAQVTAELALILFSQARRQQLDSPLQLEQRLRGWRRRKMQSHGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcgcctggctacgccccagcgcgcccgagctggaccacgccaagcgccag
cgcctggcccggttgcccaagcccgtgccgctgggggtatgtaccctgcgtgagcagcgc
tgggtggtgctggacctggaaaccagcgggctcaaccccaaccgtgatcaggtactgtcg
attggggcggtggccatcgaagacggtgccatcgactttgcccagcagttcgaacgcaca
ttgcaccggcctttgcagaagaccaacgccagcgtactgatccacggcttgggccccagc
gcattggctgccggttgcgacccggccgaggccttgctggatttgctcgatttcattggc
aacagcccggtgctggcgtttcacgcgccattcgaccagcgcatgctggcccgtgcgctg
aaagagacccttgggcatcgcttgcagtcaatgttcctagacgttgccgaactggcaccg
atgctcaacccagacacggtactgcgcgaggccgggctggatgactgggtggcacggttt
ggcttgcaggttgaagaacgccatcatgccagtgccgatgcccaggtgactgcagaactg
gcgctgatcctgttcagccaggcccggcgccagcagctggacagcccgctgcagcttgag
caacggttgcgcgggtggcgacggcgcaagatgcagagtcatggtttgtaa
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