Pseudomonas putida F1: Pput_0560
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Entry
Pput_0560 CDS
T00537
Name
(GenBank) TonB-dependent receptor, plug
KO
K16092
vitamin B12 transporter
Organism
ppf
Pseudomonas putida F1
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppf02000
]
Pput_0560
Transporters [BR:
ppf02000
]
Other transporters
Pores ion channels [TC:
1
]
Pput_0560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABQ76728
UniProt:
A5VXW8
LinkDB
All DBs
Position
complement(623953..625824)
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AA seq
623 aa
AA seq
DB search
MKKFACATILCTPTFLLAAERDDALKLPDVLISASRQVESRTATSAANTVFTRTDIDRLQ
PTSVTDLLSRVPGVQVAPTGGRGSLPGIFIRGTKAAQSLVLVDGVRIANATSGDSGLQFL
DIDQIERIEVLRGSRSAVYGSDAIGGVIQIFTRRSSGPGLQPRLRMAAGSNQTFQRSLGL
SGGNDTTRFNLGASLDETAGIDSTGPSFASDGDHDAYRNKALNLSLSHTFGERFEAGLNV
LDSRGRSEYDNPFGGFDPVTFESFGQQPYTDFSVSSLGSYVDVQVTETWHSRLELAHGEN
RDDKRDKLSAERFVFNTYRDQATWQNDLALGEQNTILIGGDWYEDRVHGSTDFTEDSRWN
RAVFAQHRYQGEQISTELGVRHDRNQQFGGQTTWSGSLTVPLNAHNDVLLSYSEGFRAPT
FNDLYYPQFSNPNLDPEHSRSYELQWRSQLTAESRLEVSLYRTDLRDAIIFGQDSIPRNV
ASARINGVEMALAQQWGAWHSQLGLALIDPRDRDTGHTLARRARRTLSLDLDREFGRFSV
GASWQAVSSSYDDEANRNRIGGYGLLGLRGSWAASDELKLEAKLDNLLDRSYSRALYSYE
GAYHPYREEGRTVLFSVTWTPAL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttgcctgtgccacgattctctgtacccctacattccttctggccgctgag
cgcgacgacgccctcaaactccccgacgtgctgatcagcgccagccgccaggtcgaatcg
cgtaccgccaccagcgctgccaacacggtcttcacccgcaccgacatcgaccgcctgcaa
cccaccagcgttaccgacctgctctcccgcgtaccgggcgtgcaagtggcacctaccggt
ggccgtggtagcctgccgggcatctttatccgtggcaccaaggccgcgcaaagtctggtg
ctggtcgatggcgtgcgcatcgccaatgccacctcgggcgacagcggcctgcagtttctg
gacatcgaccagatcgagcgcatcgaagtactgcgcggctcgcgctcagcggtgtacggc
agcgatgccattggcggggtgatccagatcttcacccgacgcagcagtggccccggtctg
cagccacgcctgcgcatggccgccggcagcaaccagacattccaacgcagcctggggctt
tctggcggcaacgacacgacccgcttcaaccttggcgccagcctggacgaaactgccggc
atcgactcgaccgggccatccttcgccagcgatggtgaccacgacgcctaccgcaacaag
gccctgaacctgagcctgagccacaccttcggtgagcgcttcgaggccggcctgaacgtg
ctcgacagccgtgggcgcagcgagtacgacaacccgttcggcggcttcgaccccgttacc
ttcgagagcttcggtcaacaaccctacaccgacttcagcgtcagcagcctgggcagttac
gttgacgttcaggtcaccgaaacctggcattcacgccttgaactggcccatggcgagaac
cgagacgacaaacgcgacaagctcagcgctgagcgcttcgttttcaacacctaccgcgat
caggctacctggcagaacgacctggccctcggcgaacagaacaccatactgatcggtggc
gactggtacgaagaccgcgtacacggcagtaccgacttcactgaggacagccgctggaac
cgtgccgtgttcgcccagcaccgctaccagggcgagcagatttccactgagctgggggtg
cgccatgaccgcaaccaacagtttggtggccagaccacctggagcggcagcctgaccgta
ccgctgaacgcgcacaacgatgtgctgctgtcctacagcgaaggcttccgcgcgccaaca
ttcaacgacctgtattacccacagttcagcaacccgaacctggacccagagcactccaga
agctacgagctgcaatggcgcagccagctgactgcagagagccggctggaggtttcgctg
taccgcaccgacctgcgcgacgcgatcatctttggccaggactcgataccccgcaacgtc
gcctcggcacgaatcaatggcgtggaaatggcgctggcgcagcaatggggcgcctggcac
agccagcttggcctggcgctgatcgacccacgcgaccgcgacactggccacaccctcgcc
cgccgcgcccgccgcaccttgagcctggatctggaccgtgagttcgggcgtttcagcgtg
ggtgccagctggcaggcggtcagcagcagttatgacgatgaggccaaccgtaaccgcatc
ggtggctatggcctgctaggtttgcgcggcagttgggcggctagcgacgaactgaaactc
gaagccaagctggataacctgctggaccgcagctacagccgcgccctttacagctacgag
ggtgcgtatcacccttaccgcgaagagggccgcactgtgctcttcagcgttacctggaca
ccggcgctttag
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