Pseudomonas putida F1: Pput_0737
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Entry
Pput_0737 CDS
T00537
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppf
Pseudomonas putida F1
Pathway
ppf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pput_0737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppf03021
]
Pput_0737
Transcription machinery [BR:
ppf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pput_0737
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_DeoR
HTH_11
HTH_23
HTH_31
HTH_7
HTH_29
HTH_38
HTH_6
HTH_22
HTH_20
PAC_M
HTH_IclR
HTH_28
HTH_40
Motif
Other DBs
NCBI-ProteinID:
ABQ76901
LinkDB
All DBs
Position
complement(825422..825937)
Genome browser
AA seq
171 aa
AA seq
DB search
MQINDTLKPTEVALLYQSHHAWLRGWLRSRVGCSEHAADLAQDTFVRLLRARHVSPLKEP
RAYLSSIARGLMIDQFRRRALERAYQESLAHLPEAEVPSEEDKLVILDSLERLDRALHQL
KPRVRQAFLLAQLDGLSIVQVAQRLEVSRATVERDLAKALGVCYRLRYADA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaacgacacgctcaagcccaccgaggtcgctctgctctaccagtctcaccat
gcctggttgcgtggttggttacgcagccgggtcggttgcagtgaacatgccgcagacctg
gcccaggataccttcgtgcggttgttgcgcgcccgccacgtgtcgccgctcaaagaaccg
cgcgcctacctcagcagcatcgcccgtggcttgatgatcgaccagttccgccgccgcgcg
ctggagcgggcctaccaggagagcctggctcacctgcccgaagcagaagtgcccagcgaa
gaggataagcttgtcatcctcgatagcctggaacgcctcgaccgcgccttgcaccagttg
aaaccgcgcgtccgccaagcgttcctgctggcccagctagacggtttgagcatcgtgcag
gttgcccaacgtctggaggtgtccagggccaccgttgagcgcgatctggcgaaggccctg
ggcgtctgctaccggttgcgctatgccgatgcctga
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