Pseudomonas putida F1: Pput_0844
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Entry
Pput_0844 CDS
T00537
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppf
Pseudomonas putida F1
Pathway
ppf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pput_0844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppf03021
]
Pput_0844
Transcription machinery [BR:
ppf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pput_0844
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_28
HTH_23
MerR
HTH_11
HTH_17
HTH_29
HTH_24
GerE
Motif
Other DBs
NCBI-ProteinID:
ABQ77006
LinkDB
All DBs
Position
966363..966890
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AA seq
175 aa
AA seq
DB search
MPVADSPSPYPLEQLYSEHHGWLFSWLRRKLRCSHSAADLAQDTFVRILASRDALLGMRE
PRAYLSTTARRLLIDRVRRQQIEEAYLSELALAAEALEGHQSPESILITLEALEQIAFLL
EGLHVNAREAFVGYYLDDLTQPQIAKRLQISPRMVRKYLAQALIHCHRTLDIAEP
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtagccgactcaccgagcccgtacccgcttgaacagctgtacagcgagcaccat
ggctggcttttcagctggctacgtcgcaagctgcgttgttcgcacagcgcagccgacctg
gcccaggacaccttcgtgcgcatcctggcctcgcgtgatgccttgctgggcatgcgcgag
ccacgcgcctacctcagtaccaccgcacgccgcctgttgatcgaccgggtgcgccgacag
caaatcgaggaggcctacctcagcgaacttgccttggctgccgaggcgctggaagggcac
cagtctcccgaaagcatcctcatcaccctcgaagcgctggaacagatcgctttcctgctg
gaaggcctgcacgtgaatgcccgcgaggccttcgtcggttactacctggacgacctgacc
cagcctcagattgccaaacgcctacagatttccccacgcatggtgcgcaagtatctggcc
caggccctgatccattgccaccgcacgctggacattgccgaaccgtga
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