Pseudomonas putida F1: Pput_0977
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Entry
Pput_0977 CDS
T00537
Name
(GenBank) RNAse G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ppf
Pseudomonas putida F1
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppf03019
]
Pput_0977
03009 Ribosome biogenesis [BR:
ppf03009
]
Pput_0977
Messenger RNA biogenesis [BR:
ppf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pput_0977
Ribosome biogenesis [BR:
ppf03009
]
Prokaryotic type
rRNA processing factors
Pput_0977
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
ABQ77138
UniProt:
A5VZ28
LinkDB
All DBs
Position
1103388..1104845
Genome browser
AA seq
485 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFVDI
GLERAAFIHASEISQREGSAVENITALVHEGQALVVQVTKDPIGTKGARLTTQLSIPSRY
LVYMPRSSHVGISLKIEDEAERERLKQVVSDCMDSENIKDAGGFILRTAAEGARAEEILQ
DIRYLRRLWEQIGTQIKTCGAPTVIYEDLGLALRTLRDLVNPKIEKIRIDSRETFQKTTQ
FVGELMPEIADRLEHYPGERPIFDLYGVEDEIQRALERKVPLKSGGYLVVDPAEAMTTID
VNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNIGGIIIIDFIDMEDEDHQRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCLACQGRGKLKTPETICYEI
FREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELEAFIGRTIRFQVESMYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagatcctgatcaacatcaccccgatggagtcacgtgtggcggtggtggaa
aacggggtgctgcaggaagtgcatgtcgagcgcacccagcgccgtggcatcgtcggcaat
atctacaagggcaaggtggtgcgtgtgctgccaggcatgcaggcggccttcgtcgacatc
ggcctcgagcgcgcagcgtttatccatgcctcggaaatctcccagcgcgaaggctcggcg
gtagagaacatcaccgcactggtacatgaaggccaggccctggtggtgcaggtgaccaag
gacccgatcggcaccaagggggcgcgcctgaccacccagctatcgatcccgtcgcgctac
ctggtgtacatgccacgcagcagtcatgttggtatttcgctgaaaatcgaggacgaggcc
gagcgtgagcgcctcaagcaagtggtcagcgactgcatggacagcgagaacatcaaggat
gccggcggcttcatcttgcgcaccgccgccgaaggcgcgcgtgccgaggagatcttgcag
gacatccgttacctgcgccgcctgtgggagcagatcggcacccagatcaagacctgcggc
gcgcccacggtcatttacgaagaccttggtctggccctgcgtaccctgcgcgacctggtc
aatccgaagatcgagaagatccgcatcgactcgcgggaaaccttccagaagaccacgcag
ttcgttggcgagttgatgccggaaattgccgaccgcctcgaacattaccccggcgagcgc
ccaatctttgacctgtacggtgtcgaagacgagattcagcgggctctggagcgcaaggtg
ccgttgaagtccggcggttacctggtggtcgacccggccgaagcgatgaccaccatcgac
gtcaacaccggggctttcgtcggccatcgcaacctcgaagaaaccatcttcaagaccaat
ctcgaggccgctaccgccatcgcccggcaactgcgcctgcgcaacattggcggcatcatc
atcatcgacttcatcgacatggaagacgaagatcaccagcgtcaggtactgcgtaccctg
gaaaaacagctggagcgcgatcacgccaagaccaacatcatcggcatcaccgagttgggc
ctggtgcagatgacccgcaagcgtacgcgggaaagcctggaacaggtgctttgcgagccg
tgtctggcctgtcagggccgcggcaagctgaaaacacccgagaccatctgttacgaaata
ttccgcgagatcctgcgtgaggcccgtgcctatcaggctgaaggctaccgtgtgctggcc
aaccagaaggttgtcgaccgcctgctggatgaagagtcaggcaacgtggcggaactggaa
gcctttatcggtcgaaccattcgcttccaggtcgagtcgatgtattcgcaggaacaatac
gacgtggtgctgctctga
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integrated database retrieval system