Pseudomonas putida F1: Pput_1339
Help
Entry
Pput_1339 CDS
T00537
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf00061
Fatty acid biosynthesis
ppf00071
Fatty acid degradation
ppf01100
Metabolic pathways
ppf01212
Fatty acid metabolism
ppf02024
Quorum sensing
ppf04146
Peroxisome
Module
ppf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pput_1339
00071 Fatty acid degradation
Pput_1339
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pput_1339
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pput_1339
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppf01004
]
Pput_1339
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppf04147
]
Pput_1339
Enzymes [BR:
ppf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pput_1339
Lipid biosynthesis proteins [BR:
ppf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pput_1339
Exosome [BR:
ppf04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pput_1339
Exosomal proteins of breast cancer cells
Pput_1339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABQ77499
UniProt:
A5W039
LinkDB
All DBs
Position
1502712..1504400
Genome browser
AA seq
562 aa
AA seq
DB search
MQADFWNDKRPAGVPSTIDINAYASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSA
AFAAWLQQHTDLKPGERIAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKD
SGARALVYLNMFGKRVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKLKKMVPAYR
LPQAVPFKQVLREGRGPSPKPVSLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVL
ACFSQHGPDGQKLLKDGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFI
KELGKWRFSALLGLNTLFVALMDHPGFRQLDFSALKVTNSGGTALVKATAERWENLTGCR
IVEGYGLTETSPVASTNPYGQLARLGTVGIPVAGTAFKVIDDDGNELPLGERGELCIKGP
QVMKGYWQQPEATAQALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIE
DVVMGHPKVANCAAIGVPDERSGEAVKLFVVPREGGLSVDELKAYCKANFTGYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgacttctggaatgacaagcgcccggcaggcgtgccttccaccatcgacatc
aatgcctacgcctcggtcgttgaggtgttcgagcgctcctgcaagcgctttgccgaccgc
ccggcgttcagcaacctgggcgtgaccctcagctacgcggaactggagcgccattcggca
gccttcgctgcctggttgcagcagcacaccgacctcaaaccgggtgagcgcatcgccgtg
cagatgcccaatgtgctgcagtaccccatcgccgtattcggtgccatgcgcgccgggctg
atcgtggtcaataccaacccgctgtacaccgagcgcgagatgcgccaccagttcaaggac
agtggcgcgcgtgcgctggtgtacctgaacatgttcggcaagcgcgtgcaggaggtgctg
cccgataccggtatcgaatacctgatcgaggcaaagatgggcgacctgctgccagccgcc
aagggctggctggtcaacaccgtggtcgacaagttgaagaagatggtgccggcctaccgg
ttgccccaggcggtgccgttcaagcaggtgctgcgcgagggccgcgggccgtcgcccaaa
ccggtgtcgctgaacctcgatgacatcgctgtgctgcagtacaccggcggtaccaccggc
ctggccaagggcgccatgctcacccatggcaacctggtggccaacatgctgcaggtgctg
gcctgcttctcgcagcacggccccgatgggcagaagctgctgaaggacggccaggaggtg
atgatcgcgccgctgccgctgtaccacatctatgccttcaccgcgaattgcatgtgcatg
atggtcaccggcaaccataacgtgctgattaccaacccgcgggatattcccggcttcatc
aaggagctgggcaagtggcgtttctctgccttgctgggcctcaataccttgtttgtcgca
ctgatggaccacccgggcttccgtcagctggacttctcggcgctgaaggtcaccaactct
ggtggcacagcgctggtcaaggccaccgccgagcgttgggaaaaccttaccgggtgccgc
atcgttgaaggttatggcctgacagagacctcgccggtggccagcaccaacccctatggc
cagctggcgcgtctgggtacggtgggcatccccgtggcgggtactgcgttcaaggtcatc
gatgatgatggcaacgaactgccgctgggcgagcggggcgagctttgcatcaaaggcccg
caggtcatgaagggttactggcagcagcccgaggcaacggcccaggcactggatgcagaa
ggctggttcaagaccggtgatatcgcggtgatcgacccggacggcttcacccgcatcgtc
gaccgcaagaaggacatgatcatcgtctcgggcttcaacgtgtaccccaacgaaatcgag
gatgtggtgatggggcaccccaaggtcgccaactgtgcggctatcggcgtgccggacgag
cgttccggcgaggcggtcaagctgttcgtggtgccgcgcgagggggggctgagcgttgat
gagctgaaggcctactgcaaggccaacttcaccggctacaaagtacccaagcacatcgtg
ctgcgcgaatcgttgcccatgactccggtgggcaagattctgcggcgggagttgcgcgat
atagcgtga
DBGET
integrated database retrieval system
