Pseudomonas putida F1: Pput_1494
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Entry
Pput_1494 CDS
T00537
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
ppf
Pseudomonas putida F1
Pathway
ppf02020
Two-component system
ppf02025
Biofilm formation - Pseudomonas aeruginosa
ppf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pput_1494
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
Pput_1494
02025 Biofilm formation - Pseudomonas aeruginosa
Pput_1494
09142 Cell motility
02040 Flagellar assembly
Pput_1494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppf03000
]
Pput_1494
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppf02035
]
Pput_1494
Transcription factors [BR:
ppf03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pput_1494
Bacterial motility proteins [BR:
ppf02035
]
Flagellar system
Flagellar assembly proteins
Others
Pput_1494
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_22
AAA_7
nSTAND3
AAA
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABQ77651
UniProt:
A5W0J1
LinkDB
All DBs
Position
1678868..1680343
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AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSARRRDLAVVLNFLGEENLACASHDWQQAVEPLSSSREVLCVLIGTV
NAPGNLLGLLKTVATWDEFLPVLLLGEISSAELPEDLRRRVLSNLEMPPSYSQLLDSLHR
AQVYREMYDQARERGRQREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSIDVRIIAATHKNLETMIEDGTFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSASIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVSELPKKFRYVDDEDEQMVDSLRSDLEERVAINGHTPN
FSNHAMLPPEGLDLKDYLGSLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRQGGEEQAED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaagattctgctgatcgatgacgacagcgcgcgccgccgcgacctt
gcggtggtgctgaacttcctcggcgaagaaaacctcgcatgtgccagccatgactggcag
caggcggtcgagccattgtcctcgagccgcgaagtgctgtgcgtgctcatcggcaccgtg
aatgctccgggcaatctgcttgggctgcttaagacagtggctacctgggatgagttcctt
ccggttctgcttttaggtgaaatttcttctgccgagctgccggaagaccttcgccgccgg
gtgctgtccaacctggaaatgccgccaagctacagccagctgctggattcgctgcaccgt
gctcaggtttaccgcgaaatgtacgaccaggcgcgcgagcgcggtcgccagcgcgagccc
aatctgttccgtagcctggtgggcaccagccgtgccattcagcacgtgcggcaaatgatg
cagcaagtggcggataccgacgccagcgtgctgatcctgggtgagtccggcaccggcaag
gaagtggtggcgcgcaacctgcactaccattccaagcgccgtgaagcgccgttcgtgccg
gtcaactgtggcgcgatcccggccgagctgctggagagcgaactgttcggccacgagaag
ggcgcctttaccggggccatcaccagccgtgccgggcgtttcgagctggccaacggcggt
accctgttcctcgatgaaatcggcgacatgccgttaccgatgcaggtcaagctgctgcgt
gtgctgcaggagcgtaccttcgagcgcgtgggtagcaacaagacccaaagcatcgacgtg
cgcatcatcgctgcgacgcacaagaacctcgaaaccatgatcgaggacggcaccttccgc
gaagacctgtactaccgcctgaacgtgttccctatcgaaatggcaccgttgcgtgagcgg
gtggaagacatcccgttgctgatgaacgagctgatttcgcgcatggagcacgagaagcgc
ggttccattcgcttcaattccgcctcgatcatgtcgctgtgtcgtcacggctggccgggt
aacgtgcgcgagctggccaacctggtcgagcgcatggcgatcatgcacccgtacggggtc
attggcgtgtcggaactgccgaagaaattccgctatgtcgatgacgaagacgagcagatg
gtcgacagcctgcgcagcgacctggaagagcgcgtggcgatcaatggccacacacccaat
ttcagcaaccacgccatgctgccgcccgaaggcctggacctcaaggactacctgggtagc
ctggagcagggcctgatccagcaggcgctggacgatgccaacggtatcgttgcgcgcgcg
gctgaacgtttgcgtattcgccgtaccaccctggtcgagaaaatgcgcaagtacggcatg
agccgccagggtggcgaggaacaggccgaggattga
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