Pseudomonas putida F1: Pput_1805
Help
Entry
Pput_1805 CDS
T00537
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ppf
Pseudomonas putida F1
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppf03016
]
Pput_1805
Enzymes [BR:
ppf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Pput_1805
Transfer RNA biogenesis [BR:
ppf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Pput_1805
Prokaryotic type
Pput_1805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ABQ77958
UniProt:
A5W1E8
LinkDB
All DBs
Position
complement(2073021..2073980)
Genome browser
AA seq
319 aa
AA seq
DB search
MDLLFLGTSAGVPTKARNVSATAVIEASGSHWYLVDCGEGTQHRLLHTPLSIRDLRAIFI
THVHGDHCFGLPGLLASAGMSGRTQPLEVILPAVLHDWVRQGLVASDTFLPFELRLLPVE
ALIAWRSETLQVTTVQLSHRVPSVGFVFTEINPEPRLDIQRLDAEGIPRGPLWGELAKGL
TVTFNGQLLNGNDYLRPSRPPQRVIVCGDNDKPALLAAVARGADVLVHEATFTQAVVERT
GGTFGHSTAAEVARFAEAAGVRNLVLTHFSARYQNDPRRSPHIDTVRDEALAHYSGQLTL
AQDLQRYHLGRNGLLEASA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacctgctgttcctcggcacctccgccggggtgcccaccaaggcacgcaatgtcagc
gccacagctgtgatcgaagccagtggcagccactggtatctggtcgattgcggcgaaggc
acccagcaccgcctgctgcacaccccgctttcgatccgcgacctgcgcgcgatcttcatc
acccacgtgcatggtgaccattgcttcggcctgcccggcctgctggccagcgcgggcatg
agcgggcgcacccagccgctggaagtgatcctgcccgccgtactgcacgattgggtacgc
cagggcctggttgccagcgacaccttcctgccgttcgagctacgcctgttgcccgtggaa
gcgctgatcgcatggcgcagcgagaccctgcaggtgaccaccgtgcaactgtcgcaccgg
gtgcccagcgtgggtttcgtattcaccgaaatcaaccctgagccacgcctggacatccag
cgcctggacgccgagggcataccgcgtggtccgctgtggggcgagctggccaaggggttg
accgtgacgttcaacgggcaactgctgaacggcaacgactacctgcgcccttcgcgtccg
ccccagcgggtgatcgtgtgcggggacaacgacaaaccagcgctgctggcagccgtcgcc
aggggggcggatgtactggtgcacgaagccaccttcacccaggcggtggtcgaacgcacc
gggggcacgttcggccacagcaccgccgctgaggtggcacgctttgccgaggccgctggc
gtgcgcaacctggtactgacgcatttcagcgcccgctaccagaacgacccacggcgcagc
ccgcacatcgacaccgtgcgcgacgaggccctcgcccattacagcgggcagttgaccctg
gcgcaggacctgcagcgctatcaccttggccgtaacggccttcttgaggccagtgcctag
DBGET
integrated database retrieval system
