Pseudomonas putida F1: Pput_2301
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Entry
Pput_2301 CDS
T00537
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppf
Pseudomonas putida F1
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppf03000
]
Pput_2301
Transcription factors [BR:
ppf03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pput_2301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
PAS_4
AAA_5
PAS_9
PAS
HTH_30
AAA_2
HTH_28
AAA
HTH_1
HTH_29
HTH_22
HTH_23
HTH_7
HTH_20
AAA_16
AAA_7
AAA_22
PAS_8
HTH_11
Diguanyl_cycl_sensor
HTH_17
Mga
Motif
Other DBs
NCBI-ProteinID:
ABQ78440
UniProt:
A5W2T0
LinkDB
All DBs
Position
2616773..2618683
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AA seq
636 aa
AA seq
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MARQLITNAHDPLHESREARLKLVSEGELPLGMLRDEIDASWRRSLGHGLDCLQGEQVGL
GLEQGHDLRLLLARNRLLIDAVTPELDYLVARQGKAGIVILGDAQANVLAIEGQKHVLQR
EGLRDLHPGSCWSESLRGTNAIGTAVVEGRPTLINCGEHYLDRLSPFSCTSVPLRDPRGE
VIGVLDITREGVMAQPQDSLSTLMLAAGNIESRLFGLCHPDQLVLAFHSRPQYLNSAWHG
LLALSLDGEVLAANDSACQLLQVPRHELIGRRSTDLLGERSPAFIARLWQGGVSSVQTAK
GEFYFRALQLPRHGRVTPSTPSSKPALSKQSPALDALAGGDQRLARNLRMARQGLGNGLP
VLLLGETGTGKEVVARALHQASPRADKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRG
GMVGRLMQAHGGTLFLDEIGDMPLALQARLLRVLQERRVAPLGAGDEQDIDVALICATHR
DLKRLVQEQHFREDLFYRVNGVSLRLPALRERDDLAAIIQGLLDKADARGVTLDPALTAL
LEGFDWPGNIRQLEMVVRTALAMREDGEQVLTLDHLTDCLLDELASSAAPSGSLKDSELE
QIRGALARHQGNVSAAAAALGISRATLYRKLKQLRG
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgacaacttataacaaacgcccacgacccgctgcacgaatcccgcgaggcccgc
ctgaagctggtcagcgaaggcgaactaccgctgggcatgctgcgtgatgagatcgacgct
tcctggcgccgcagcctgggccacggcctggattgcctgcagggcgaacaggtcggcttg
ggcttggaacagggccatgacctgcgcctgctgctggcgcgcaaccgcctgttgatcgat
gccgttacccccgaactcgactacctggtcgcgcgccagggcaaggctggcatcgtcatc
ctcggcgatgcccaggccaacgtgctggccatcgaaggccagaagcacgtgctgcaacgc
gaaggcctgcgcgatctgcacccgggcagttgctggagcgaatcgctgcgcggcaccaat
gccatcggcacggccgtggtcgaaggccggccgacgctgatcaactgcggcgaacattac
cttgaccgcctgagcccgttctcctgtacttccgtgccactgcgcgacccgcggggcgag
gtgatcggcgtgctcgacatcacccgcgaaggggtgatggcgcaaccgcaggacagcctg
tcgaccctgatgctggcggccggcaacattgaaagccgcctgtttggcctgtgccacccg
gaccagttggtgctggccttccacagccgcccgcagtacctcaacagtgcctggcacggc
ctgttggccctgagcctggacggcgaagtgctggctgccaacgacagtgcctgccagctg
ttgcaggtgccgcgtcacgaactgattggtcggcgcagcaccgacctgctgggcgaacgt
tccccggcctttatcgctcgcctgtggcagggtggggtcagcagcgtgcagaccgccaag
ggcgagttctatttccgtgccctacagctgccgcgccatggccgggtaacccccagcaca
ccatccagcaagccggccttgagcaaacagtcacctgcactcgatgctctggccggtggt
gatcaacgcctggcgcgcaacctgcgcatggctcgccaggggctgggcaatggtttgcca
gtgctgctgctgggcgaaaccggtaccggcaaggaagtggtcgctcgcgccttgcaccag
gccagcccgcgtgccgacaaaccgtttgtggcagtcaactgcgcggccattcccgaaggg
ctgatcgagtccgagctgttcggctaccgtgagggcgccttcaccggttcgcgccggggc
ggcatggtcgggcggctgatgcaggcccatggtggcacgctgttcctcgacgaaatcggc
gacatgccgctggccctgcaagcacgcctgctgcgggtgctgcaggagcgccgcgtagca
cccttgggggcgggcgacgagcaggacatcgacgtggcgctgatctgcgccacccaccgc
gacctcaagcgcctggtgcaggagcagcacttccgtgaagacctgttctaccgggtcaac
ggcgtgtcgctgcgcctgccggccctgcgcgaacgcgacgacctggcggcgatcatccaa
ggcctgctggacaaggccgatgcgcgtggcgtaaccctcgacccggcgttgaccgcgttg
ctcgaaggcttcgactggccaggcaacatccgccagctggaaatggtggtgcgcaccgcc
ctcgccatgcgcgaggatggcgagcaggtgctgacactcgatcaccttaccgactgcctg
ctggacgaactcgccagcagcgcagcgccctccggcagcctcaaggacagtgaactggaa
cagattcgcggtgctctggcgcgccaccagggcaacgtctcggccgccgccgcggcactg
ggtatcagccgggcgacgctgtaccgcaagctcaagcagttgcgcggctga
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