Pseudomonas putida F1: Pput_2615
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Entry
Pput_2615 CDS
T00537
Name
(GenBank) YD repeat protein
Organism
ppf
Pseudomonas putida F1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
prePAAR_I
DUF6531
RHS
PAAR_motif
AHH
Nkap_C
Motif
Other DBs
NCBI-ProteinID:
ABQ78750
UniProt:
A5W3P0
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All DBs
Position
complement(2981534..2985736)
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AA seq
1400 aa
AA seq
DB search
MFEAARFGDEISHTSALGGFLIGAALGIALVATVAIATFTCGFGVALLAGLAAGIGGSLL
TAAGEAIGSMFSSPSGTITTASPNVFINSRKAARVEKSIGACDKHPGPVQIAEGSTNVFI
NSVAAARKGDKLTCGATISGGSDNVIIGGGTYRYLPVDDEVPEWLRTTVDVLMAIAGAAG
GIAQLIKAGTQAGMKAVMPCALKFTAGFVAGEVASRYVVEPVARKAIGGLVGNPVDLTTG
RKLIPDEIDFSLPGLMPIEWSRFYASDLTVDSVLGRGWVLPWEQSLRRQGAFIYLTDNQG
REVPFVTLQPGQRIYNPHEQVYLVCTEGGHYILQTLDNLFFYFGEVPDTNTEVPLQRIEN
VLGHFLHFTRTPDGTLTDISATGGTRVHLHYDNPLGRLTDIKRVVNNEAVETLTQYRYDE
HGQLSAVINRNGDTVRSFSYADGLMVTHSNALGLGCHYRWQTLGDKPRVVEHWTSDGEHY
HFRYDLDSRTSWATDVLGRELEVQYNADHRVVASRDYGGERYAIELDENGNMVGLTLPDG
NRLQFKYDEFSRLLEETDPLGRRTTYEYHHLTTLVTQVSYPDGSTWRARYDDKGNLLAEF
DALGQMTEYLNSDDGLPHTIIDATYKSKYLWWNTLAQVERYQDCSGKSTYYRYDERQHLV
AVTNALNQTTTLERKPDGEVLRISHPDGTTESFTYNVYGQVLSHTDGKGQTTRLMRTARG
LPSSRQDAKGQRVRYEYDKAIRLTALVNENNATYSFAYDASDRLSEEVRVDNLTRRFSYD
VGGHLTRLDEIGYGENAERPERHTLFERDAIGRLVAKINRDASQTFAYDDGDRLLSIARQ
PTGIGKQLGITEEKLEYTYDLLGRLTKEITPDGTLGYEYDPLSNLTTLTLPDGRKVNHLY
YGSGHLHQLNLDGLVISDMERDDLHREVYRTQGKLTSCFGYDAMGRKAWQFASTLPADKL
SQVHNTGINTSLLVEHAYNPIHRRYQYDPAGELVRTLDKLRGEIKYEYEANGQLRSRDTG
SLIGSEEFRYDPAANRLDFNARQFDKVKDNRIKQWRDQEYRYDPWGNLIEKRSGHSKLQS
FSYDCENRLVRAETLVNGKLESRGEYRYDSLGRRIAKQAEINGEVEQKRFLWQGLRMLRE
ESPAKSILYLYEPGSYAPLARVDQVEGEGQKVYYFHTDQIGTPLELTDSEGEIVWQATYR
SWGEIEQLAVNEVEQNLRFQGQYFDAETGLHYNTFRFYVPEIGRFLTQDPIGLAGGDNLY
QYAPSPIGWIDELGLSCNSDAKLLRKELGISPQGGGQYDAHHIVMSNSKDARMIALRKKM
DELDIDINDKRNGIWLPNTESARVPGTTATPHKGAGVHGKAYKQYVFDKLSVANGREEFL
SALSEVKQSLFDGISFKTIR
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagcggccaggttcggcgacgagatatcgcacaccagcgcgctggggggcttc
ctgatcggggccgccctggggattgcgctggtggccacggtggccatcgccacgttcacc
tgcgggttcggcgtggccttgctggccggcctcgcagccggcatcgggggcagcttgctg
actgccgccggagaggcgataggcagtatgttctcgtccccctcagggacgataaccact
gcctcacccaacgtgttcatcaacagccgcaaggccgcccgcgtcgaaaaaagcatcggt
gcctgcgacaagcacccagggccggtgcagattgccgaaggctcgaccaacgtcttcatc
aacagcgtcgccgccgcgcgcaagggcgacaagctgacctgcggcgccaccatttccggt
ggttcggacaacgtcatcatcggcggcggcacctaccgttacctgcccgtggacgatgaa
gtcccggagtggctgcgcaccaccgtggatgtgctgatggccatcgccggtgccgcaggc
ggtatcgcccagctgatcaaggcgggtacccaggccggcatgaaagccgtcatgccttgc
gcgctgaagttcacggccggcttcgtcgccggtgaggtggccagccgttacgtggtcgaa
cccgtggcccgcaaggctatcggcggcctggtcggcaaccccgtcgacctcacgacgggc
cgcaagctgatccccgatgaaatcgacttcagcctgccgggcctgatgccgatcgagtgg
tcgcgcttctacgccagcgacctgacggtcgacagcgtactcggccgcggctgggtgctg
ccctgggagcagagcctgcgccgccagggggcattcatctacctcaccgacaaccagggc
cgcgaagtcccgttcgtgaccctgcaaccggggcagcgcatctacaacccgcacgagcag
gtgtacctggtgtgcaccgagggcggccactacatcctgcagaccctcgataacctgttc
ttctacttcggcgaagtgccagacaccaacaccgaagtgccgctgcagcgtatcgagaac
gtcctcggccacttcctgcacttcacccgcacgcccgacggcacactgaccgacatcagc
gccaccggcggcacccgcgtgcacctgcactacgacaacccgctgggccgcctgaccgac
atcaagcgcgtggtgaacaacgaagcggtggaaacgcttacccagtaccgctacgacgaa
cacggccagctgagcgcggtgatcaaccgcaacggcgacaccgtgcgcagcttcagctac
gccgacggcctgatggtgacccacagcaacgcgctggggctgggctgccactaccgttgg
caaaccctgggcgacaagccacgtgtggtcgaacactggaccagcgacggcgagcactac
cacttccgctacgacctcgatagccgcaccagctgggccaccgacgtacttggccgcgag
ttggaagtgcagtacaacgccgaccaccgcgtggtcgccagccgcgattatggcggcgag
cgttacgccatcgagctggacgaaaacggcaatatggttggcctgaccttgccggacggt
aaccgcctgcaattcaagtacgacgaattctcccgcttgctcgaagagaccgacccgctc
ggccgcaggaccacctacgagtatcaccacctgaccacactggtgacccaggtcagctac
ccggatggcagcacctggcgagcgcgttacgacgacaagggcaacctgctcgccgaattc
gatgccctcggccagatgaccgagtacctgaacagcgatgacggcctgccgcacaccatc
atcgatgcgacctacaagtccaagtacctgtggtggaacaccctggcccaggtcgagcgc
taccaggactgctcgggcaagagtacgtactaccgctatgacgaacgccagcacctggtg
gcggtgaccaatgcgctaaaccagaccaccacgctggagcgcaagcccgacggcgaagtg
ctgcgcatcagccacccggacggcaccacggaaagcttcacctacaacgtctacgggcag
gtgctcagccacaccgacggcaagggccagaccacccgcctgatgcgcacggcccgcggc
ctgccgagcagccgccaggatgccaagggccagcgggttcgctacgagtacgacaaggcc
attcgcctgaccgcgctggtcaacgagaacaacgccacgtacagctttgcctacgacgct
tcggaccggctgagcgaagaagtgcgggtggataacctgacccggcgtttcagctacgac
gtcggtggccatctcacacgactggatgagattggctatggcgaaaatgccgagcggccc
gagcgccatacgctgttcgagcgtgatgccattggccgtttggtcgccaagatcaaccgt
gatgcgagccagacattcgcatacgacgacggtgaccggttgctgagcatcgcgcggcaa
ccgaccggcatcggcaagcagcttgggatcacagaagaaaagctggaatacacctacgat
ctgctcggccggctgacgaaagaaatcacccctgacggcacgcttggctatgagtacgac
ccgcttagcaacctgaccacgctgaccctgccggatgggcgtaaggtcaatcacctgtac
tacggcagcggccacctgcaccagctgaacctggacgggttggtgatcagcgacatggag
cgtgacgacctgcaccgcgaggtgtaccgcacgcagggcaagctcaccagctgcttcggt
tatgacgccatggggcgcaaggcctggcagtttgcctcgaccttgccggccgacaagctt
tcgcaggtgcacaacaccggcatcaatacctcgttgctggtcgagcacgcctacaacccg
atccaccgccgttaccagtacgacccggccggtgaactggtgcgtaccctcgacaagcta
cgcggcgagatcaagtacgaatacgaagccaacggccagttgcgcagtcgtgataccggc
tcgttgatcggcagcgaggaattccgctacgacccggcagccaaccgcctggacttcaat
gcgcggcagttcgacaaggtcaaggacaatcggatcaaacagtggcgcgatcaggagtac
cgctacgatccgtggggcaacctgatcgagaagcgctctgggcacagcaagctgcagagc
tttagctatgactgcgagaaccggctggtgcgggcggagacgttggtcaatggcaaactg
gaaagccgaggcgagtatcgttacgacagcttggggaggcgaatagccaagcaggctgaa
atcaatggtgaggtcgagcagaagcgcttcctctggcaagggctaaggatgctgcgggag
gaatcgcctgcgaagagcatcttgtacctgtacgagccgggtagctatgcgccgttggcg
cgggttgatcaggttgaaggggaagggcagaaggtctattacttccatactgaccagatt
ggaaccccgctggagctgaccgatagcgagggtgagattgtctggcaggcgacatatcgc
tcgtggggtgagatagagcagctagcggtcaatgaggtggagcagaacctacgcttccaa
ggtcagtactttgatgccgaaacggggctgcactacaacacgttccgattctatgtccct
gaaatcgggagatttctgacacaagaccccatcggtctagcaggtggagataatttatat
caatatgcacctagccctatagggtggatcgatgaactaggtctgtcgtgcaactcagat
gccaagcttcttcgaaaagaactcgggataagtccacaggggggaggtcagtatgatgcg
catcatattgtgatgtccaactcgaaagatgcgaggatgattgcactccggaaaaagatg
gatgaattggacattgatataaatgataagcgtaatgggatttggctgcccaataccgag
tctgcaagggttccaggtacaactgccacccctcacaaaggtgcgggtgtgcacggcaaa
gcctataagcaatatgtctttgataagctttccgtagccaatggtcgagaggaatttctc
agcgcactttccgaggttaagcagtcgctgtttgatggtatttcatttaaaacgataagg
tag
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