Pseudomonas putida F1: Pput_3664
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Entry
Pput_3664 CDS
T00537
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppf
Pseudomonas putida F1
Pathway
ppf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pput_3664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppf03021
]
Pput_3664
Transcription machinery [BR:
ppf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pput_3664
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_20
Sigma70_ECF
HTH_23
HTH_28
Xre-like-HTH
HTH_40
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
ABQ79788
LinkDB
All DBs
Position
4098890..4099390
Genome browser
AA seq
166 aa
AA seq
DB search
MATLDPQALHQLYSENNSWLKGWLRARLGNAADASDLAHDTFLRVMTARNPLPIREPRSY
LSAIARALLIDKARRRIIEKAYLQALALRPEPVEVSPEVRLSIIEMLVAVDSLLDELGAK
TRAIFLAVQLEGLTYGAAAERFGVSITTVKNHLIKAMTRCLLAVEG
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgctcgatccccaggccctgcaccagctgtacagcgaaaacaacagctggctg
aagggctggctgcgcgcccgcctgggcaacgccgccgacgcttccgacctggcgcacgac
acgttcttgcgggtaatgaccgcgcgtaacccgttgccgatccgtgagccgcgcagctac
ctcagcgctatcgcccgcgcccttctgatagacaaagctcgccgtcgcatcatcgaaaaa
gcttacctgcaggcgctggccctgcgtccggaaccggtagaggtgtcgccggaggtgcgc
ttgtccatcatagagatgctggtggccgtggacagcctgctcgacgaactcggcgccaag
acccgcgccatcttccttgccgttcaactcgaaggcctgacctacggcgctgcggccgag
cgcttcggcgtgtcgatcaccaccgtgaagaatcacctgatcaaggccatgactcgctgc
ctgctggcagtcgaaggctga
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integrated database retrieval system
