Pseudomonas putida F1: Pput_3717
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Entry
Pput_3717 CDS
T00537
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppf
Pseudomonas putida F1
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppf03400
]
Pput_3717
DNA repair and recombination proteins [BR:
ppf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pput_3717
Archaeal homologous recombinant proteins
Pput_3717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ABQ79841
UniProt:
A5W6T1
LinkDB
All DBs
Position
4163511..4164749
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AA seq
412 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNGRGKVAAWCLALPFLRPAEVTGPQLGDDYLQGITQVHQQLIAAALKKRKKD
QALIAISHAHMAGGAVSEDSERSLIIGNAEALPAKLFDKAISYVALGHLHKPQKVNREER
IRYSGSPIPLSFAEINYPHQVLEVELDGNGLVSVEPRPVPRAVALQRVGPAPLGELLQQL
ADLPVIDLLEDPNRQPWLEVRVMLDEPQPDLRQQIETALEGKAVRLIRISAEYAGRNNAE
DDDLAFVELAQMTPQDLFSRAWEQAYGNPADEQALADFALLLQDVQQEEEQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcatacctccgactggcacctgggccaaagcctgcacggccaggaacgc
gacttcgaacacgcctgcttcctcgactggctgctcggccagctgcgcctgcgccagccg
gatgcgctgctgattgcgggcgacatcttcgacaccgtcaacccacccgtcaaagcccag
gaacgcctctacgacttcatcgtccaggcccatgagcaacagcccaagctggacattgtg
atgatcgccggcaaccacgactccggttcgcgcatcgagctgcccgccgcactcatgcgc
cgcctgcgcacccatgcgttgggccgtgtgcactggctggacgagggtcagctggatgcc
gagcgcctgttgattccgctgaccaacggccggggcaaggtcgctgcctggtgcctggcc
ctgcccttcctgcggccggccgaagtcaccggcccgcagctgggtgacgattacctgcaa
ggcatcacccaggtgcaccagcaactgatcgccgccgccctgaagaaacgcaagaaagac
caggcgctgatcgccatcagccacgcgcacatggccggtggcgcggtgtcggaagactcc
gaacgcagcctgatcatcggcaacgccgaggcgctgccggccaagctgttcgacaaggct
atcagctacgtcgccctgggccatctgcacaaaccgcagaaggtcaaccgcgaagaacgc
atccgctacagcggctcgccaatcccgctgtcgttcgccgaaatcaactacccgcaccag
gtcctggaagtggagctggacggcaacggcctggtcagcgtcgagccacgccccgtacca
cgcgccgtggccctgcaacgggtgggcccggcaccgctgggcgagctgttgcagcaactg
gccgacctgcccgtgatcgacctgcttgaagaccccaaccgccagccctggctggaggtg
cgggtgatgctcgacgagccgcaacccgacctgcgccagcagatcgaaaccgcgcttgaa
ggcaaggcggtacggttgatccgcatcagcgccgagtacgccggccgcaacaacgccgag
gacgatgacctggcctttgtcgaactggcccagatgaccccgcaagacctgttcagccgc
gcctgggagcaagcctacggcaaccccgccgacgagcaggcgctggccgacttcgccctg
ctgttgcaggacgtgcagcaggaagaggaacagccatga
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