Pseudomonas putida F1: Pput_3718
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Entry
Pput_3718 CDS
T00537
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppf
Pseudomonas putida F1
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppf03400
]
Pput_3718
DNA repair and recombination proteins [BR:
ppf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pput_3718
Archaeal homologous recombinant proteins
Pput_3718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
ABC_tran
nSTAND3
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ABQ79842
UniProt:
A5W6T2
LinkDB
All DBs
Position
4164746..4168390
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LNAIGREAKVPDADGDIPTSDPRNLLRRGTGSGFAEVDFVGIDGRRYRARWEANRARDKA
NGKLQHSRQSFYDLDSEQVLGSGKNEYKQLVEARLGLNFEQFTRAVMLAQSEFGAFLKAD
DKDRSELLEKLTNTAIYTRLGQRAFSKAREAGEAHNTLKERASHLLPMAAEARAELDKRL
EQAQQQFKADQAGERQLEQQRNWLNEQCQLQAQHTEASTTLQAAELDWQQLAEPRLDLAR
LERLAPQRHQFHRRQALSAQLAPVAAKMAEQQQQQAELQVRTRELEQALDTARQALADRQ
AQHSENAPRLRQAFAAQDSLARLDQELAAQRSISQQAQQQVADGQQQLQQLEDNQQRSVQ
QLAQIDTALADSQHLAGLANAWHAYLPQLKQVMLIGGRLTKGREELPGLQAQASQANAHL
QAERDAYDLLFREAKAEPQALAEQIDLLGGMLQDNRKQQRAVEEMSRLHGREQELRQQLD
ALRERQQQAMLQRQQLITEGTAAKAELEAAEQALILTRQLLERQRLARNTSVEELRDQLR
DGEPCPVCGSAEHPFHQPEALLQSLGRHDQAEEHAAQKQVETLNNTLVELRTQLGVVNAQ
LKDFQQQQQQLGEQLQPLVAQVQAHSLWPALAPQDDKARSTWLDSQLRRLDEEISQDEKR
QSALLALQKDAARLNQQLQAAHDAQQQAQRHLEQQHQALANDEQLLQQGLNDLAGVLPEE
ALKALNDDPANAFLALDQQIAQRLQQLEQRKDEQEEQQARQAQLDKLRDQQQARVQGLQQ
LQHTLAALDEQRQQAQTSLGELLGEHASAEACQQHMEATLEQARALDADTAQRLQDLRTQ
GVQLASELKANTQQQQALDAECQQLQAQIAQWRSEHPELDDAGLDRLLAMDDAQVNELRQ
RLQGAEKAIEQGRVLLQEREQRLQQHAAQMTVDTSAEALEHALTELRGRLVNHEQQCAEL
RAQQADDQRRQQAHQALAAEIEQAHQQWQRWARLNALIGSASGDVFRKIAQGYNLDLLLH
HANAQLRQLARRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSDVEVCG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccatccgcctgaagaacctggcatcgctggccggcccgatcgacatc
gatttcaccgcagaaccgttggccagcgctggcctgttcgctatcaccgggcctaccggt
gctggcaagagcaccttgcttgacgccctgtgcctggcgctgttcggcaccgtgccgcgc
ctcaatgccattggccgtgaggccaaggtgccggacgccgacggcgacatccccacctcc
gacccgcgcaacctgctgcgccgtggcaccggcagcgggtttgccgaggtcgatttcgtc
ggcatcgacggccgccgctaccgcgcccgctgggaagccaaccgcgcccgcgacaaggcc
aacggcaaactgcagcacagccgtcaaagcttctacgacctcgacagcgagcaagtgctc
ggcagtggcaagaacgaatacaagcaactggtcgaagcccgtttgggcctgaacttcgaa
cagttcacccgtgcggtgatgctggcccagagcgagttcggcgcgttcctcaaggccgac
gacaaagaccgcagcgagttgctggaaaagctcaccaacaccgcgatctacacccgcctg
ggccagcgtgccttcagcaaggcgcgcgaagccggcgaggcgcacaacaccctgaaagag
cgcgccagccacctgctgccgatggctgccgaggcccgtgccgagctcgacaagcgcctg
gagcaggcgcagcagcagttcaaggccgaccaggccggcgagcgccagctggagcagcaa
cgcaactggctgaatgaacaatgccagctacaggcccaacacaccgaagccagcaccacg
ctgcaggccgccgaactggactggcaacagctggccgaaccacgcctggacctggcacgc
ctggagcgcctggccccacagcgtcaccagttccaccgccgacaggccctgagcgcacag
ctggcgccagtggccgcgaaaatggccgaacagcaacagcagcaagccgaactgcaggtg
cgcacccgcgagctcgaacaggcgctggacactgcgcgccaagcgcttgcggaccgccag
gcccagcacagcgagaacgcgccgcgcctgcgccaggcctttgccgcccaggacagtctg
gcacgcctggaccaggagctggccgcccagcgcagcatcagccaacaggcccaacaacag
gtcgctgacggccagcagcaactgcagcagctggaagacaaccagcagcgcagcgtgcag
caactggcgcagatcgacaccgcgcttgccgacagccagcacctggcgggcctggccaat
gcctggcacgcctacctgccgcaactgaaacaggtgatgctgatcggtggccgcctgacc
aagggccgagaagagctacccggcttgcaggcccaggccagccaggccaatgcgcacctg
caggccgagcgcgatgcctacgacctgttgttccgtgaagccaaggccgaaccccaggcc
ctggccgaacagatcgacctgctcggcggcatgctgcaggacaaccgcaaacagcagcgc
gccgtagaagaaatgtcacgcctgcacggccgtgaacaggagctgcgccagcagctggat
gccctgcgcgaacggcagcagcaggccatgctgcaacgccagcaactgattaccgaaggc
accgccgccaaggccgagctggaggccgccgagcaggcgttgatcctcacccgtcaactg
ctggaacggcaacgcctggcacgcaacaccagcgtcgaagaactgcgtgaccaactgcgt
gacggcgaaccctgcccggtctgtggcagcgccgaacaccccttccatcagccagaagcg
ctgctgcagagcttgggtcgccatgaccaggccgaagagcacgccgcgcagaagcaggtc
gaaacgctcaacaacacgctggtggagctgcgtacccagctgggtgtggtcaatgcccag
ctcaaggacttccagcagcaacagcagcaactgggcgaacagttgcaaccgctggtggct
caggtacaggcacacagcctatggccagccctcgccccgcaggacgacaaggcccgtagc
acctggctcgacagccagctgcgtcgcctggatgaagaaatcagccaggacgagaaacgc
cagagcgccctgctggccctgcaaaaagacgccgcccgcctgaaccagcaattgcaggcg
gcccacgacgcccagcaacaggcccaacgccatctggagcaacagcaccaagccctggcc
aacgacgaacagctgttgcagcaaggcctgaacgacctggccggcgtactgccagaggaa
gcgctcaaggccctcaacgacgacccggccaatgccttcctcgccctcgaccagcagatt
gcccagcgcctgcagcaactggaacagcgcaaggacgaacaggaagaacagcaagcccgg
caagcccagctggacaaactgcgcgatcagcaacaggcgcgcgtgcaaggcctgcaacag
ttgcaacacacgctcgcggccctcgacgaacagcgccagcaggcccagacgtcgctcggc
gagctgctaggcgaacatgccagtgccgaagcctgccagcagcatatggaagccacgctg
gaacaagcccgcgccctcgatgccgacaccgcccagcgcctgcaagatctgcgcacccaa
ggcgtgcaactggccagcgagctcaaggccaatacccagcaacaacaggcactggatgcc
gaatgccaacagttgcaggcccagatcgcccagtggcgcagcgagcatccggaactggac
gatgccggcctcgatcgcctgctggccatggatgacgcgcaagtcaatgaattgcgccag
cgtttgcaaggcgcggaaaaagccatcgagcagggccgcgtgctgctgcaggaacgtgag
cagcgcctgcaacaacacgccgcacaaatgaccgtggacacctcggccgaagccttggaa
cacgccctgaccgagctgcgcgggcggctggtcaaccatgagcagcagtgcgccgaattg
cgtgcacaacaggccgacgatcagcgccgccagcaggcccaccaggcgctggcggcagaa
atcgaacaggcccaccagcagtggcaacgctgggcccgcctcaatgccctgatcggttcg
gcctccggtgatgtgttccgcaagatcgcccaaggctacaaccttgatctgctgctgcac
cacgccaacgcccagctacgtcagctggcccgtcgctaccgcctcaagcgcggcggcagc
gcccttggcctgctggtgctggacaccgagatgggcgacgaactgcgttcggtgcactcg
ttgtcgggcggggaaaccttcctggtgtcgctggccctggcgctgggcctggcgtcgatg
gcgtccagcaccttgcgtatcgagtcgctgttcatcgacgaaggcttcggcagcctcgac
cccgagtcgctgcaactggcaatggacgccctcgacggcttgcaagcccagggccgcaaa
gtggcggtgatttcccacgtacaggaaatgcacgagcgcatcccggtgcagatccaggtg
cggcgccagggtaatggcctcagtgacgtggaggtgtgcgggtga
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integrated database retrieval system
