Pseudomonas putida F1: Pput_4063
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Entry
Pput_4063 CDS
T00537
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ppf
Pseudomonas putida F1
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppf03009
]
Pput_4063
Enzymes [BR:
ppf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Pput_4063
Ribosome biogenesis [BR:
ppf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pput_4063
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_25
Methyltransf_31
Cons_hypoth95
MTS
Methyltransf_11
Methyltr_RsmB-F
TRM5-TYW2_MTfase
Methyltransf_23
RrnaAD
Methyltransf_37
Methyltransf_15
Methyltransf_ANTKMT
PCMT
Methyltransf_4
Ubie_methyltran
TPMT
PrmA
DREV
Motif
Other DBs
NCBI-ProteinID:
ABQ80187
LinkDB
All DBs
Position
complement(4580082..4581440)
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AA seq
452 aa
AA seq
DB search
MSKKKSNSGLRFQPAGGNRTPQVPVGKKQRLDIERLAGDGRGIAFLDGRTWFVSGALAGE
AVEARVLNARGKVVEARLERLLQAAPERREAPCRYYDRCGGCNLQHLPHEAQLALKQRTL
AEQLQRVAGVQPEAWAAPLSGPEFGYRRRARVAVRWDVKARQLEVGFRAEASQDIIAIDD
CAVLVQPLQSILRHLPTVLRSLSKPQALGHVELFSGTAEAVLVRHVAPLPAEDQARLQAF
CEQANAQLWLQGEGEPAPVDPAAQLGFALAPWQLELAWRPGDFVQVNAQVNTAMIEQALA
WLAPQADERVLDLFCGLGNFALPLARQAREVVAVEGVQAMVDRAAANARNNNVHNARFFQ
ADLSQPLAGTGWAAEGFSAVLLDPPRDGAFEVVQGIARLKASRLVYVSCNPATLARDAQV
LVGQGYRLKRAGILDMFPQTAHVEAMALFEAG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaaaaaaagcaacagcggcctgcgcttccagccggccggcggcaatcgcacc
ccccaggtcccagtgggcaagaagcagcgcctggacatcgagcgcctggccggtgacggc
cgtggcattgccttcctcgacgggcgtacctggttcgtcagtggcgccttggccggtgag
gccgtggaggcgcgggtgctcaacgcccgtggcaaagtggtcgaggcacgcctggagcgg
ttgctgcaggcggcgcccgagcgccgtgaggcgccatgtcgctactacgaccgctgcggt
ggctgcaacctgcagcacctgccgcacgaagcgcaactggcgctgaagcagcgcaccctc
gccgagcagttgcagcgggtggccggcgtgcaacccgaggcgtgggctgcccccctgagc
gggccggaattcggctaccggcgccgcgcccgtgtggccgtgcgctgggacgtcaaggcg
cgtcagctggaggtgggtttccgcgccgaagccagccaggacatcattgccatcgacgat
tgtgcagtgctggtacaacccttgcagtccattttgcgccacttgccgacggtgctgcgt
tcgttgagcaagccgcaggcgctgggccatgtagagctgttcagtggcaccgccgaggcg
gttctggtgcgccacgtcgcgccgttgccggccgaggaccaggccaggttgcaagcgttc
tgcgagcaggccaacgcccagctatggctgcaaggcgaaggtgagccggcgcccgtggac
ccagcggcgcagttgggcttcgccctggcaccttggcagctggagctggcctggcgcccg
ggcgatttcgtgcaggtgaatgcccaggtcaatacggcgatgatcgagcaggctttggcc
tggctcgcgccacaagccgacgagcgtgtgctggacttgttctgcggtctgggcaacttt
gccctgccgctggcccgccaggcgcgtgaggtggtggcagtggaaggtgtacaggccatg
gtcgatcgggccgcggccaatgcccggaacaacaatgtgcataacgcacggttttttcag
gccgatttatcgcagcctttggcaggcaccggatgggccgccgagggcttttctgcggta
ctcttggatccaccgcgcgacggtgctttcgaggtggtgcaaggcatcgcccgcctcaag
gccagcaggctggtctacgtatcgtgcaacccggccacgctggcgagagacgcccaagtg
ctggtcggccaggggtaccggttaaaaagggccgggattctcgacatgtttcctcagacg
gcgcatgtcgaggccatggcgttattcgaagcgggctag
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