Pseudomonas putida F1: Pput_4158
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Entry
Pput_4158 CDS
T00537
Name
(GenBank) tRNA pseudouridine synthase D, TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppf
Pseudomonas putida F1
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppf03016
]
Pput_4158
Enzymes [BR:
ppf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Pput_4158
Transfer RNA biogenesis [BR:
ppf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pput_4158
Prokaryotic type
Pput_4158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
CinA_KH
Motif
Other DBs
NCBI-ProteinID:
ABQ80282
UniProt:
A5W822
LinkDB
All DBs
Position
complement(4654645..4655703)
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AA seq
352 aa
AA seq
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MTELELLGPRASGEPLGTAVLKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRSISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDASLRVLKQVRHQR
KLQRGAHSANGFTLRLTALAADHQAVDARLEQLRQQGVPNYFGTQRFGHGGGNVHDALDW
AARKALPEQRNVRSRLLSAGRSYLFNQLLAARVADGSWARAQVGDLLAFTDSRSFFPAGE
AECADPRLAILDLHPTGPMWGEGASPAGAAPAQLENAIGARQPALCQWLAQAGMDHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVREVVDLVSAGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaattgctgggcccgcgcgcatcgggcgaacccctgggcaccgccgtc
ctcaaagcggttgccgaagactttcaggttgacgaagtcctggatataccgctatcgggc
caaggcgagcacctgtggctgtgggtcgagaagcgtgatctgaacactgaagaagccgcc
cggcgccttgcccgcgctgctggcgtgcccgtgcgcagcatcagctatgccggcctgaag
gaccgccaggcgctcacccgccagtggttcagcctgcacctgccgggcaaggccgatccg
gatctgtcgcgtgccgaggatgccagcctgcgtgtgctcaaacaggtgcgtcaccagcgc
aaactgcagcgcggcgcgcattcggccaacgggttcaccttgcgcctgaccgccctggct
gccgatcaccaggcggtggatgcgcgcctggagcagctcaggcagcaaggtgtgcccaac
tacttcggcacccagcgctttgggcacggtggtggcaacgtccacgacgccctcgattgg
gccgcgcgcaaggctttgcctgaacagcgcaacgtgcgttcgcggctgctttcggccggg
cgcagctacctgttcaatcagttgctggctgcgcgtgtcgctgacggtagctgggcccga
gcccaggtcggggacctgctggcgttcaccgacagccgcagtttcttcccggcgggtgag
gcggaatgtgccgacccgcggctggcgattctcgacttgcatccaaccggcccgatgtgg
ggggagggcgcttcacctgctggcgctgcgcctgcccagctggaaaacgctatcggcgca
cgtcagccggcactttgccagtggctggcccaggcgggcatggatcacgaacggcgaatt
ctgcggctccctattggcggcctgacgtggcattatcccgagcctgatatcctgcaactg
gaattcgtcctgccggccggatgcttcgccaccgtggtggtgcgtgaagtcgtggatctg
gtgtcggcagggcagacggacagcccatgcgtattctga
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