Pseudomonas putida F1: Pput_4288
Help
Entry
Pput_4288 CDS
T00537
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Pput_4288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppf03019
]
Pput_4288
03009 Ribosome biogenesis [BR:
ppf03009
]
Pput_4288
03036 Chromosome and associated proteins [BR:
ppf03036
]
Pput_4288
Enzymes [BR:
ppf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Pput_4288
Messenger RNA biogenesis [BR:
ppf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pput_4288
Ribosome biogenesis [BR:
ppf03009
]
Eukaryotic type
90S particles
RNase
Pput_4288
Prokaryotic type
rRNA processing factors
Pput_4288
Chromosome and associated proteins [BR:
ppf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Pput_4288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ABQ80412
UniProt:
A5W8F2
LinkDB
All DBs
Position
complement(4796790..4797479)
Genome browser
AA seq
229 aa
AA seq
DB search
MSASLAGLERKLGYTFKNQDQMLLALTHRSYAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDADMDTARERILAWLADEFEGLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAASALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttcccttgccggtctggagcgaaagctcggttacaccttcaagaaccaggac
cagatgctcctggcactgacccatcgcagttacgccgggcgcaacaatgagcgcctggag
ttcctcggtgacgccattctcaacttcgttgccggcgaagcgctgttcgagcgttttccg
caggctcgcgaaggccagttgtcgcggctgcgtgcgcggttggtcaagggggagaccctg
gcccgtctggcccgtggttttgatctgggcgattacctgcgcctgggttccggagaactc
aagagcggcggctttcgccgcgagtcgatcctggccgacgccctggaggcactgattggt
gccatctacctggacgctgacatggacaccgcccgggagcgcattctggcctggctggcc
gatgagtttgaaggcctgacactggtcgacaccaataaagatccgaaaacccgcctgcaa
gagttcctgcagtcgcgcagctgtgagctgccgcgttacgaagtcgtggatatccagggt
gaaccacactgccggaccttcttcgtcgaatgcgaagtggtactgctgaacaacaagagc
cgtggtcaaggcgttagccggcgtattgccgagcaagtcgccgccgcgtctgcactgatc
gccctgggcgtggagaatggcaatgactga
DBGET
integrated database retrieval system
