Pseudomonas putida F1: Pput_4363
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Entry
Pput_4363 CDS
T00537
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pput_4363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppf03019
]
Pput_4363
03110 Chaperones and folding catalysts [BR:
ppf03110
]
Pput_4363
03029 Mitochondrial biogenesis [BR:
ppf03029
]
Pput_4363
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppf04147
]
Pput_4363
Enzymes [BR:
ppf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Pput_4363
Messenger RNA biogenesis [BR:
ppf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pput_4363
Chaperones and folding catalysts [BR:
ppf03110
]
Heat shock proteins
HSP60 / Chaperonin
Pput_4363
Mitochondrial biogenesis [BR:
ppf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Pput_4363
Exosome [BR:
ppf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pput_4363
Exosomal proteins of other body fluids (saliva and urine)
Pput_4363
Exosomal proteins of breast cancer cells
Pput_4363
Exosomal proteins of colorectal cancer cells
Pput_4363
Exosomal proteins of bladder cancer cells
Pput_4363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
ABQ80486
UniProt:
A5W8M6
LinkDB
All DBs
Position
complement(4880461..4882101)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLAKSFGAPTITKDGVSVAKEI
ELKDAFENMGAQLVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATAAVVAELKNLSKPCADSKAIAQVGTISANSDNSIGEIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQV
ISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADTEIEARVKQIRAQIEETSSDY
DREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALAAIVDLKGDNEDQNVGIALLRRAVESPLRQITANAGDEPSVVADKVKQGSGNFGYNA
ATGEYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVADLPEDKPAAGMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtaaaatttggtgattccgcccgtaagaaaatgctggttggtgtc
aacgttctggctgacgcggtaaaagcgaccctgggcccgaaaggccgtaacgtggtactg
gccaagagcttcggcgcgccgaccatcaccaaggacggcgtttccgtcgccaaagaaatc
gagctgaaagacgctttcgaaaacatgggcgcccagctggtcaaggaagttgcttccaag
gccaacgacgctgccggtgacggcaccaccaccgctaccgttctggctcaggccatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctgaagcgcggtatc
gacaaggccactgctgccgttgttgccgagctgaagaacctgtccaagccatgcgccgac
tccaaggccatcgcccaggtaggtaccatctctgccaactccgacaactccatcggtgaa
atcatcgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtccgtcgtagaaggcatgcagttcgaccgcggctacctg
tcgccgtacttcgtcaacaagccggacaccatggttgccgagctggaaggcccgctgctg
ctgctggtcgacaagaaaatctccaacatccgtgagctgctgccagttctggaagccgtt
gccaaggccggccgcccactgctgatcgttgccgaagacgttgaaggtgaagcgctggct
accctggtagtcaacaacatgcgcggcatcgtcaaggttgctgcagtcaaggctccaggc
ttcggcgatcgccgcaaggccatgctgcaggacatcgctgtcctgactggcggccaggtc
atctccgaagaaatcggcctgtccctggaaaccgctaccctggagcacctgggtaacgcc
aagcgcgtcatcctgtccaaggaaaacaccaccatcatcgacggtgctggcgctgacacc
gagatcgaagcacgcgtcaagcagatccgtgcccagatcgaagaaacttcctcggactac
gaccgtgagaagctgcaagagcgtctggccaagctggctggcggtgttgccgtgatcaag
gtgggtgccggcactgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgtgcagccgttgaagaaggcgtggtgcctggcggtggtgttgccctggtt
cgcgccctggcggccatcgtcgacctgaaaggcgacaacgaagaccagaacgtcggtatc
gcgctgctgcgtcgcgctgttgaatccccgctgcgccagatcactgccaacgccggtgat
gagccaagcgtggttgctgacaaggtcaagcaaggttcgggcaacttcggctacaacgcc
gctaccggtgaatacggcgacatgatcgagatgggcatcctggacccagccaaggttact
cgctcggcgctgcaagctgctgcttcgatcggcggtctgatgatcaccaccgaagccatg
gttgccgacctgccggaagacaagccagctgctggcatgcctgatatgggcggcatgggt
ggcatgggcggcatgatgtaa
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