Pseudomonas putida F1: Pput_4537
Help
Entry
Pput_4537 CDS
T00537
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pput_4537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppf03400
]
Pput_4537
Enzymes [BR:
ppf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Pput_4537
DNA repair and recombination proteins [BR:
ppf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pput_4537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
AAA_25
PHBC_N
Motif
Other DBs
NCBI-ProteinID:
ABQ80657
UniProt:
A5W947
LinkDB
All DBs
Position
complement(5063737..5067411)
Genome browser
AA seq
1224 aa
AA seq
DB search
MTQDRPLALSFPLHGSQLIEASAGTGKTFTISALYLRLILGHGGEQGFERELLPPQILVV
TFTDAATKELRERIRARLAEAARFFRGELEGADPLLHQLRDDYPQETWLRCAGRLEIAVQ
WMDEAAVSTIHGWCQRMLREHAFDSGSLFTQTLETDHSELLGQVMRDYWRRFCYGMQGDA
LAWVRGNWGSPDALLPRIRPLFGRVRAQQDGPEPAALIQASLQQRGAQLARIKAPWAQWA
EELRQICRDALAAKQVDGRKMQARYFEPWFDKLCAWASDEQLVELDLGTGFTRLTPAGMA
EAWKGEPPEHPALNAMQHLQQQLQALDSPDAPLLEHAASWVSARFEVEKRRRAEMGFDDM
LVRLQHALASEAGERLASLIREQFPVALIDEFQDTDPVQYGIFERIYQISENRAETGLFM
IGDPKQAIYAFRGADIYTYLAARRATSGRLHSLDTNYRSSKAMVAAVNQVFLQAEAREAG
RGAFLFREADDNPLPFIEVRAKGRGEQLLIDGEVSAALQCWQLESEEPVSSSVYRQQLAA
SCASHIVALLNGGQQGTAGFQNAEGELRACLPSDIAILVRDGHEAQMVRAELAAREVRSV
YLSDKDSVFAAQEAHDLLAWLKACAEPDSERLLKAALASLTLGLSLAALDRLNQDERVWE
SWVMRFRLYRDTWQRQGVLPMLRHLLHDFQLPRTLIRRSDGERVLTNLLHLAELLQQAAG
ELDGEQALIRHLAEHLASSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVYLPFICT
SKPVDGSRLPLAWHDSEGNAHLTLTPDEEQIERADDERLAEDLRLLYVALTRAQHACWLG
VADLKRGNQKSSQLHRSAFGYLLGGGLALAGSAQLTDWLQALAASCPHITCPGLPQADEQ
MYRMPHAERELLPARRPRHAAAEHWWIASYSALRVGDQTLGADSSQAQQLLDDEVPDAQV
LREVPADSGDIHRFPRGPNPGTFLHGLLEWAGREGFSEVSGNPQLIERTVGQRCNRRDWA
GWIPTLSHWMQRLLGEALPLPGSDQSVTLGQLRHYQIEMEFWFASHRVDAEQLDRLVARH
THPGLARPAAQPTVLNGMFKGFIDLAFELDGRYYVTDYKSNWLGADIQAYDAMAMEKAIL
EHRYDLQYVLYLLALHRQLRARLADYDYDRHVGGALFIFLRGASSSGHGVYHAKPPRELI
ESLDALFRGEHAPVQQDLFAGVAP
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaccgtcctctggcactgagtttccccctgcacggtagccagctgatcgag
gccagcgccggcacgggcaagaccttcaccatttcggcgctgtacctgcgcctgatcctc
ggtcacggtggcgaacagggcttcgagcgcgagctgctgccaccgcagatccttgtggtg
accttcaccgacgccgcgaccaaagagctgcgcgagcgtatccgcgcccgcctggctgaa
gccgcacggttcttccgtggcgagctggaaggcgccgatccgctgttgcaccaactgcgt
gacgattacccacaagagacttggctgcgttgcgccggccggttggaaatcgccgtgcag
tggatggacgaggctgcggtatcgaccatccatggctggtgccagcgcatgctgcgcgag
catgccttcgacagcggcagcctgttcacccagaccctggaaaccgaccacagcgagttg
ttgggccaggtcatgcgcgattactggcggcgcttctgctatgggatgcaaggtgacgca
ctggcctgggtgcgcggcaactgggggagtccagacgccttgctgccgcgcattcgccca
ctgttcggccgtgtgcgcgcccagcaggatgggccagagcccgccgcattgatccaggca
tcgctgcagcaacgtggtgcacagttggcccggatcaaggcgccatgggcacagtgggcc
gaggaactgcggcaaatctgccgcgatgcgctggccgccaaacaggtcgacggccgcaag
atgcaagcccgttacttcgagccctggttcgacaagctctgcgcttgggccagcgatgag
caactggtagagctcgacttgggcaccggctttacccggctgaccccggcgggcatggcc
gaggcctggaagggagaacctcccgagcacccagccctcaacgccatgcagcacttgcag
caacaactgcaggccctggacagcccggatgcccctctgctcgagcacgcggccagttgg
gtatcggcacgtttcgaagtggagaagcgccggcgtgcagaaatgggcttcgacgacatg
ctcgtgcgcttgcagcacgcactcgccagcgaggccggcgagcgcctggccagtctgatt
cgtgagcagttcccggtagcgctgattgacgaattccaggacaccgacccggttcagtac
ggcattttcgagcgcatctaccagatcagtgaaaaccgcgccgaaaccggtctgttcatg
atcggggaccccaaacaggcgatctacgccttccgcggtgccgacatctacacctacctt
gcggcgcggcgcgccaccagcggccgtctgcacagcctggacaccaattaccgctccagc
aaagccatggtggcggcggtcaaccaggtgttcctgcaggccgaggcgcgtgaagcgggg
cggggtgcattcctgttccgcgaggccgatgacaacccgctgccattcatcgaggtgcgc
gccaaggggcgtggcgaacagctgctgattgacggtgaagtcagtgcagccctgcaatgc
tggcagctggaaagtgaagagccagtctccagcagtgtttaccgccagcaactggccgcc
agttgcgccagccatattgtcgccttgctcaatggcggccagcagggcacggcgggtttc
cagaatgccgaaggcgaattgcgcgcctgcttgccctcggacattgccatcctggtgcgc
gatggccatgaggcgcagatggtccgcgccgaactggccgcacgcgaggtgcgcagcgtc
tacctgtccgacaaggactcggtgtttgccgcccaggaagcccacgacctgctggcctgg
ctgaaggcctgcgccgagcctgactcggagcgcctgctcaaggctgctctggccagcctt
acactgggcctgtcgctggctgcgctggaccggcttaaccaggacgagcgggtctgggag
agctgggtgatgcgctttcgcctttaccgcgacacctggcagcgccaaggggtgttgccg
atgttgcgccacctgctgcatgacttccagctaccgcgtacgctgatccgccgcagtgat
ggcgagcgggtgctgaccaacctgctgcacctggccgagctgctgcagcaggccgctggc
gagctggacggcgaacaggcgcttatccgccacctggccgagcacctggccagttccggt
caggccggtgaagagcagatcctgcgcctggagagcgacgaacagttggtcaaggtggtg
accatccacaagtccaagggcctggaatatcccttggtctacctgccattcatctgcacc
agcaaaccggtggatggtagccgtctaccgctggcctggcatgacagcgaaggtaacgcc
cacctcaccctcacacctgacgaggagcagatcgagcgcgctgacgacgagcgcctggcc
gaagacctgcgcctgctctacgtggccctgacccgtgcccagcatgcatgctggctgggt
gtcgccgacctcaagcgcggtaatcagaagagctcgcagctgcatcgctcggcgtttggc
tacctgctggggggcggcctggccctggctggctcggcgcagctgacggactggttgcag
gctttggcggcaagttgcccgcacatcacttgtccgggcctgccgcaggcggatgagcag
atgtatcgcatgccacacgccgaacgtgagctgctgccagcacgcaggccacgccatgcg
gctgccgagcactggtggatcgcttcgtacagtgcccttcgtgtcggcgatcagaccctc
ggcgccgacagctcgcaggcccagcaactgctggatgacgaggtgcccgatgcccaggtg
ttgcgcgaggtcccggccgacagcggcgatatccatcgcttcccacgggggcctaacccc
ggcaccttcctccatggtttgctggagtgggcaggccgtgagggcttcagcgaggtcagc
ggtaaccctcaactgatagagcgtaccgttggccagcgctgcaaccgccgtgactgggcc
ggctggatccccaccctgagccactggatgcaacgtttgctgggcgaggcgttgccgctg
ccgggcagcgaccagagcgtaacgctgggccaactgcgtcattaccagatcgaaatggaa
ttctggttcgccagccaccgggtcgacgcagaacaactcgatcgcctggtggcacgccac
acccaccccggtctggcgcgcccagctgcgcagccgaccgtgctaaacggcatgttcaaa
gggttcatcgacctggcgttcgagctggacgggcgttactacgtgaccgactacaagtcc
aactggctgggtgcggacatccaggcctacgatgccatggccatggaaaaggcgattctt
gagcaccgctacgacctgcagtatgtgctgtacctgctggccctgcaccgccagttgcgc
gcgcggctggcggactacgattatgaccgccatgttggcggcgccctgttcatcttcctg
cgcggtgccagcagcagcggccacggcgtgtaccacgccaagccaccgcgtgagctgatc
gaaagcctcgatgcactgttccgtggtgagcacgcgccagtacagcaggacctgtttgcc
ggagttgcgccatga
DBGET
integrated database retrieval system
