Pseudomonas putida F1: Pput_4575
Help
Entry
Pput_4575 CDS
T00537
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppf
Pseudomonas putida F1
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppf03016
]
Pput_4575
Enzymes [BR:
ppf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pput_4575
Transfer RNA biogenesis [BR:
ppf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pput_4575
Prokaryotic type
Pput_4575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
ABQ80695
UniProt:
A5W985
LinkDB
All DBs
Position
complement(5118760..5119677)
Genome browser
AA seq
305 aa
AA seq
DB search
MAQVKRIRRNISGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQMGQTTNTGDAEGEVLQTRDVTVGRADIEALLPRFRGPIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTINRLELLECEGTRARLSVGCSKGTYI
RTLVEDIGEALGCGAYVAELRRTQAGPFALAQTVTLEELEQAHAEGGNEALDRFLMPSDS
GLQDWPLVSLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNARFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtatccgccgcaatatcagcggcatcatcctgctcgacaagccg
ctgggcttcacgtccaatgccgccttgcagaaagtgcgttggctgctgaacgcggaaaag
gccggccataccggtagcctcgacccgctggcgaccggcgtgttgccgctgtgcttcggt
gaagcgaccaagttttcgcagtacttgctggattccgacaagggctacgaaaccgtcatg
cagatggggcagactaccaacaccggcgatgccgagggtgaggtgctgcagacccgcgac
gtgaccgttggtcgcgccgacatcgaagcgctgctgccccgttttcgcggcccgatcagc
cagataccgcctatgtactcggcgctcaagcgtgacggccagccgctgtacaaactggca
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattaaccgcttggagttg
ctcgagtgcgaaggcacccgtgcacggttgagcgtaggatgcagcaaaggcacctatatc
cgcacgctggtggaggatatcggtgaagcccttggttgcggcgcctatgtcgccgagctg
cgcaggacccaggcagggccctttgcgctggcacagacggtcaccctcgaggaactcgaa
caggcccatgccgaaggtggcaacgaagcgctcgaccgcttcctgatgccatcggacagc
gggctgcaggactggccgttggtcagcctgtcggaacacagtgcgttctactggctgcat
ggccaggcggtacgcgcgccggacgcgccacaatttggcatggtgcgggtacaggatcac
aatgcacgcttcatcggtatcggtgaggtgagcgaagacgggcgcattgcgccgcgtcgg
ctgattcggtcggaatga
DBGET
integrated database retrieval system
