Pseudomonas putida F1: Pput_4682
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Entry
Pput_4682 CDS
T00537
Name
(GenBank) cell elongation-specific peptidoglycan D,D-transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf00550
Peptidoglycan biosynthesis
ppf01100
Metabolic pathways
ppf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pput_4682
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pput_4682
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppf01011
]
Pput_4682
Enzymes [BR:
ppf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pput_4682
Peptidoglycan biosynthesis and degradation proteins [BR:
ppf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Pput_4682
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Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Glyco_hydro_3_C
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
ABQ80802
UniProt:
A5W9J2
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All DBs
Position
complement(5248577..5250466)
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AA seq
629 aa
AA seq
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MSQPIRLKDHEKDARLVRNRVVVGAVAIMLLVCVLIARLYYLQIIQYDYHSTLSENNRVH
VQPIPPTRGLIFDRNGVIVADNRPSFSLSMTRERAGNWQEVLDTIVEVLELTADDRALFE
KRMRQGRRPFEPVPILFELNEEQIARVAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYV
GRINEKELKTLDPVNYSGTHHIGKTGIERFYEAALHGQVGYEEVETNARGRVLRVLKRTD
PKPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPRTGEVLAMVSQPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVNASSRVFDPGYYQLPNY
DHKYRNWNRSGDGWVDLDTAIMRSNDTYFYDLAHKMGIDRLSSYMNKFGIGQRVSLDMFE
ESAGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALIANKGVWNRPHL
AKTIEGLPPVDDNPMEDIVLRDKSDWAKVTHGMEQVMHNARGTARKAAAGAQYRIAGKSG
TAQVVAIKQGEKYDRNKLQERHRDHALFVAFAPAEAPKIVVSVMVENGESGSGVAAPVVR
QIMDAWLLDENGRLKPEFAPATVTQESAL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagccgatccgtctcaaggaccacgagaaagacgcccgcctggtgcgcaaccgc
gtcgtggtcggcgcagttgcgatcatgctgcttgtgtgcgtgttgatcgcacggctgtac
tacctgcagatcatccagtacgactaccactccacgctgtcggagaacaaccgggtgcat
gtgcagccgatcccgccgacccgcgggttgatcttcgaccgcaacggggtgatcgttgcc
gacaaccggcccagcttcagcctgtcgatgacccgcgaacgtgcgggtaactggcaggaa
gtgctggataccatcgtcgaagtgcttgagctcaccgctgacgaccgtgccctgttcgag
aagcgcatgcgccaaggccgccggccattcgagccggtgccgattctgttcgagctcaac
gaagagcagattgcccgcgtggcggtaaaccagttccgcctgccgggtgtcgaggtggtg
gcccagctggtgcggcattacccgcagggtgcgcattttgcccattcggtgggttatgta
gggcggatcaacgagaaagagctgaaaacgctcgacccggtgaactacagcggtacccac
catatcggcaagaccggcatcgagcgcttctacgaggccgccctgcacggtcaggtgggt
tacgaggaagtcgagaccaacgcccgtggccgtgtgctgcgggtgctcaagcgcaccgac
ccgaagccgggcaaggacattgtgctgagcctggacatcaagctgcaggaggccgctgaa
gccgccctgggaggccggcgtggtgcagtggttgcgctcgacccgcgcaccggcgaggta
ctggcgatggtgagtcagcctagcttcgaccccaacctgttcgtcaccggcatcagcttc
aaggcctatgccgaattgcgcgattcgatcgatcggccgctgttcaaccgcgtgctgcgt
ggcctgtacccgccggggtcgaccatcaagccggcggtggctattgccggtctggacagt
ggcgtcgtgaatgccagtagcagggtgttcgaccctggctactaccagttgcccaactac
gaccataaataccgtaactggaaccgctccggtgatggctgggtcgacctggacaccgcc
atcatgcgctcgaacgacacctacttctatgaccttgcgcacaagatgggcatcgatcgg
ttgtccagctacatgaacaagttcggtatcggccagcgggtatccctcgatatgttcgag
gagtctgccgggttgatgccgtcgcgcgaatggaagcgcgccactcgccgccaggcctgg
ttccccggcgaaaccctgattctcggcatcggccagggttacatgcaggccacgccgctg
cagctggcccaggccactgcattgatcgccaacaaaggtgtgtggaaccgcccacacctg
gccaagaccatcgaaggcctgccgccggtggacgacaaccccatggaagacatcgtgctg
cgtgacaagtccgactgggccaaggtcacccatggcatggaacaggtgatgcacaacgcc
cgcggtaccgcgcgcaaggcagctgccggtgcccagtaccgcattgccggcaagagcggc
accgcccaggtggtggcgatcaagcagggcgagaagtatgaccgcaacaaactccaggag
cgccaccgcgaccatgccttgttcgtcgcgtttgccccagccgaagccccgaaaatcgtg
gtttcggtgatggtcgagaacggtgagtccggctcgggtgtcgccgctccggtggttcgc
cagatcatggacgcctggctgctcgacgaaaacggccggctcaaacccgagttcgcgccc
gccaccgttacccaggaatcggccctgtga
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