KEGG   Pseudomonas putida F1: Pput_5136
Entry
Pput_5136         CDS       T00537                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ppf  Pseudomonas putida F1
Pathway
ppf00300  Lysine biosynthesis
ppf00470  D-Amino acid metabolism
ppf01100  Metabolic pathways
ppf01110  Biosynthesis of secondary metabolites
ppf01120  Microbial metabolism in diverse environments
ppf01230  Biosynthesis of amino acids
Module
ppf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Pput_5136
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Pput_5136
Enzymes [BR:ppf01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Pput_5136
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ABQ81254
UniProt: A5WAU4
LinkDB
Position
5770171..5771418
AA seq 415 aa
MNAFNYRDGELFAEGVALSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV
GVRYRDEQPPRVADYIKAIRERVGERDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSAVKPRAGEGRAYDLVGPICETGDFLGKDRVLNLTEGD
LLAVESAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETVAELYAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgaacgctttcaactaccgcgacggtgagctgttcgcggaaggcgtggccctgtcggcc
attgctgaacgttacggcacccccacctatgtgtactcgcgcgcccacatcgaggcccag
taccgtagctacgcagacgccctgcaaggtaccgagcacctggtgtgcttcgcggtcaag
gccaactccaaccttggcgtgctgaacgtgctggcgcgcctgggcgcaggctttgacatt
gtctccggtggtgaactggagcgtgtactggccgctggcgggcgtgccgaccgcgtggtg
ttctccggtgttggcaaaacccgtgaagacatgcgccgtgccctggaagttggcgtgcac
tgcttcaacgtcgaatccaccgacgagctggagcgcctgcaagtggtcgccgccgaaatg
ggcaaggttgccccggtgtcgctgcgggtcaacccggacgtcgatgccggtactcacccg
tacatctccaccggccttaaagaaaacaagttcggcatcgccattgccgatgccgaggcc
atctacgtacgcgccgcacagctaccgaacctggaagtggtcggtgtcgactgccacatc
ggctcgcaactgaccaccgtcgagccattcctcgacgccctcgaccgcctgctggtgctg
gtcgaccgcctggccgagtgcggcatacacctgcgccacctggacctgggtggcggtgtc
ggcgtgcgctaccgcgacgaacagccaccacgggtggccgactacatcaaggccatccgc
gaacgcgtgggcgagcgcgacctggccctggtgttcgagcctggccgctacatcgtcgcc
aacgctggcgtgctgctgacccgcgtggaatacctcaagcacaccgaacacaaggacttc
gcgatcatcgatgcagcgatgaacgacctgatccgcccggccctgtaccaggcctggatg
ggtgtcagcgcggtcaagccacgtgcaggcgaaggccgtgcctatgacctggtcggccct
atctgcgagactggcgacttcctcggcaaggaccgcgtactcaacctgaccgaaggtgac
ctgctggccgtagagtccgcgggcgcctatggttttgtcatgagctccaactacaacacc
cgcggccgttgcgctgaaatcctggtcgacggcgaccaggcgttcgaagtacgccgccgc
gagaccgtcgccgaactgtatgctggcgaaagcctgctgccggagtaa

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