Pseudomonas putida F1: Pput_5136
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Entry
Pput_5136 CDS
T00537
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf00300
Lysine biosynthesis
ppf00470
D-Amino acid metabolism
ppf01100
Metabolic pathways
ppf01110
Biosynthesis of secondary metabolites
ppf01120
Microbial metabolism in diverse environments
ppf01230
Biosynthesis of amino acids
Module
ppf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pput_5136
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pput_5136
Enzymes [BR:
ppf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Pput_5136
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABQ81254
UniProt:
A5WAU4
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All DBs
Position
5770171..5771418
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AA seq
415 aa
AA seq
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MNAFNYRDGELFAEGVALSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV
GVRYRDEQPPRVADYIKAIRERVGERDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSAVKPRAGEGRAYDLVGPICETGDFLGKDRVLNLTEGD
LLAVESAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctttcaactaccgcgacggtgagctgttcgcggaaggcgtggccctgtcggcc
attgctgaacgttacggcacccccacctatgtgtactcgcgcgcccacatcgaggcccag
taccgtagctacgcagacgccctgcaaggtaccgagcacctggtgtgcttcgcggtcaag
gccaactccaaccttggcgtgctgaacgtgctggcgcgcctgggcgcaggctttgacatt
gtctccggtggtgaactggagcgtgtactggccgctggcgggcgtgccgaccgcgtggtg
ttctccggtgttggcaaaacccgtgaagacatgcgccgtgccctggaagttggcgtgcac
tgcttcaacgtcgaatccaccgacgagctggagcgcctgcaagtggtcgccgccgaaatg
ggcaaggttgccccggtgtcgctgcgggtcaacccggacgtcgatgccggtactcacccg
tacatctccaccggccttaaagaaaacaagttcggcatcgccattgccgatgccgaggcc
atctacgtacgcgccgcacagctaccgaacctggaagtggtcggtgtcgactgccacatc
ggctcgcaactgaccaccgtcgagccattcctcgacgccctcgaccgcctgctggtgctg
gtcgaccgcctggccgagtgcggcatacacctgcgccacctggacctgggtggcggtgtc
ggcgtgcgctaccgcgacgaacagccaccacgggtggccgactacatcaaggccatccgc
gaacgcgtgggcgagcgcgacctggccctggtgttcgagcctggccgctacatcgtcgcc
aacgctggcgtgctgctgacccgcgtggaatacctcaagcacaccgaacacaaggacttc
gcgatcatcgatgcagcgatgaacgacctgatccgcccggccctgtaccaggcctggatg
ggtgtcagcgcggtcaagccacgtgcaggcgaaggccgtgcctatgacctggtcggccct
atctgcgagactggcgacttcctcggcaaggaccgcgtactcaacctgaccgaaggtgac
ctgctggccgtagagtccgcgggcgcctatggttttgtcatgagctccaactacaacacc
cgcggccgttgcgctgaaatcctggtcgacggcgaccaggcgttcgaagtacgccgccgc
gagaccgtcgccgaactgtatgctggcgaaagcctgctgccggagtaa
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