Pseudomonas putida F1: Pput_5137
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Entry
Pput_5137 CDS
T00537
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf00300
Lysine biosynthesis
ppf00470
D-Amino acid metabolism
ppf01100
Metabolic pathways
ppf01110
Biosynthesis of secondary metabolites
ppf01120
Microbial metabolism in diverse environments
ppf01230
Biosynthesis of amino acids
Module
ppf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pput_5137
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pput_5137
Enzymes [BR:
ppf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Pput_5137
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
ABQ81255
UniProt:
A5WAU5
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All DBs
Position
5771423..5772253
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPNNPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKSGIIVLDVQNDGQVSVNM
GPPRFIPAEIPFVADAQAPSYPLVVDGQLYSIAAVSMGNPHAVLRVDDVSTAPVHELGPK
IENHPRFPQRVNAGFIQVIDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDSPV
SLDLPGGRLHIEWAGPGKPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcatgggctgggcaacgacttcatggtcctggacctg
gtcagccagcacgcgcacattcagcccaagcacgccaagcaatggggtgaccgtcacacc
ggcatcggctttgaccagttgctgatcgtcgaggcgccgaacaacccggaagtggacttc
cgctaccgcatcttcaacgccgacggctccgaggtcgagcaatgcggcaacggtgcgcgc
tgctttgcccgctttgtgctggacaagcgcctgaccgccaaaaagcgcatccgcgtggaa
accaagagcggcatcatcgtgctggacgtgcagaacgacggccaggtgagtgtcaacatg
ggcccgccgcgcttcatccctgccgaaattccctttgtcgccgacgcacaggcgccaagc
tacccgctggtagttgacggccagttgtactcgatagccgccgtgtccatgggtaacccg
cacgccgtgctgcgtgtcgacgacgtgtctactgcgcctgtgcatgagctgggcccgaag
atcgaaaaccacccacgcttcccacagcgggtgaatgccggcttcattcaagtcatcgac
cgccaccgcgccaacctgcgcgtgtgggaacgcggcgccggcgaaacccaggcttgcggc
accggcgcctgcgccgcagccgtggcggcgatcagccagggctggatggattccccggtg
tccctcgacctgcccggtggtcgcctgcacatcgaatgggccggccccggcaagcccgtg
atgatgaccggcccggccgtacgcgtctacgaaggacaggttcgtctctaa
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