Pseudomonas putida GB-1: PputGB1_0005
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Entry
PputGB1_0005 CDS
T00650
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PputGB1_0005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppg03400
]
PputGB1_0005
DNA repair and recombination proteins [BR:
ppg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PputGB1_0005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_13
AAA_16
AAA_15
AAA_29
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ABY95921
UniProt:
B0KEV1
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All DBs
Position
3844..4947
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AA seq
367 aa
AA seq
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MSLRRIMVTAVRNLHPVTLLPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSSRLNPV
IQYEQPACTVFGEVELTEGGTCKLGVSRERQGEFTIRIDGQNARSAAQLAELLPLQLINP
DSFRLLEGAPKIRRQFLDWGVFHVEPRFLPAWQRLQKALRQRNSWLRHGTLDPASQAAWD
RELCLASAEIDEYRRNYIKALKPVFERTLSELVELDGLTLSYYRGWDKDRELQEVLASSL
LRDQQMGHTQAGPQRADLRLRLAGNNAADILSRGQQKLVVCALRIAQGHLVSQARRGHCI
YLVDDLPSELDDQHRRALCRLLEELRCQVFITCVDHELLREGWQTETPVALFHVEQGRIT
QTHDHRE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcgacgtatcatggtcaccgcggtgcgcaacttgcacccggtgacactctta
ccctccccccgaatcaacatcctttacggcgccaacggtagcggcaagaccagcgtgctt
gaagctgtgcacttgctcgggctggcacgttcatttcgcagtagtcgcctgaacccggtc
atccagtacgaacagcctgcctgtaccgtatttggtgaagtcgagttgaccgaaggcggc
acctgcaaactgggtgtatcccgagagcgccagggggagttcactatccgcatcgatggt
cagaatgcgcgcagtgccgcgcaactggcagagctgctgccgcttcagcttatcaaccca
gacagtttccggctgttggaaggtgccccgaaaatacgccgccagttccttgattggggg
gtgttccacgtggaacctcgttttctgccagcctggcaacggctgcagaaggcgctgcgg
cagcggaactcatggttgcgtcatggtacacttgacccagcttcgcaagccgcctgggac
cgggaattgtgcctggccagcgcggaaatagatgaataccgtcgcaactacatcaaggcc
ttgaagcctgtcttcgagcgaaccctgagcgaactggtcgagctggacgggttgacccta
agctactaccgaggctgggacaaggaccgggaactgcaagaagtactcgcatcctctctc
cttcgcgatcagcagatgggccatacccaggccggtccgcagcgtgctgatctgcgtctt
cgcctggctggcaacaacgcagctgacatcctgtcgcgtggtcagcagaagcttgtggta
tgcgcactgcgcattgctcaaggccacctcgttagtcaggctcgccgcggtcattgtatt
tatctcgtggatgacttgccgtccgaactggatgaccagcatcgccgcgcgctgtgtcgc
ttgcttgaagaattacgctgccaggtgttcatcacctgtgtagatcacgaattactgagg
gaaggctggcagacggaaacgccagttgctttgttccacgtggaacaaggccgtatcacc
cagacccacgaccatcgggagtga
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