Pseudomonas putida GB-1: PputGB1_0704
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Entry
PputGB1_0704 CDS
T00650
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
ppg
Pseudomonas putida GB-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_3
PAS_4
PAS_8
GntR
Motif
Other DBs
NCBI-ProteinID:
ABY96614
UniProt:
B0KMD8
LinkDB
All DBs
Position
complement(802912..806742)
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AA seq
1276 aa
AA seq
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MTNLTHPSSLRTAQQAPAVTLRGSIKGALALLALILLGLLLWQLFAQFNHTQADLRKQSL
DATAELADHLSLNMAFKAQQAVNVVQPYVNAPTPAALPSLVDTLRERLPALQSVAWLDSA
GQLRVDSLAGSPDRQLLDELLTLNQGRPYFFTNSADNRTLYLLLRQAAEQDRGYWLLRLS
PDYYRELTLYLDGGGHPLWLLENSRSGEVLQSHAPTDTSNAPLQSVMLAFIDNSTWQLRG
LFDAELAQQKLLPALIGKCLLVLFCALLPVLALINMRRRQRALQEDRRRYQEIFEGTGVA
LCVLDLSSLPSQLDRYHLRNRAALKHSLALDPNLRRSLLLELKITEVNQVARQLLNIECH
EGAWQRLIDGTGDGRDSVGMQLIDALIEQRQLLELEVRLPAPLGGELHLWLMARLPQQRR
DYQAVILSISDITSRKQVELSLLEREGFWSDVVRTVPDQLYVQDVLSQRMIFSNRHLGQT
LGYDRTELAQMGDRFWELLLHPEDAAHYQALRQQQRDSGHDQPLQCQLRFRHRDGGWRCY
DIREQVLTRDAEGLVTRIIGVGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFSTDSLL
KLNYVSPSVQSVLGYQADWIFANGWQSIIANPAQLTGIYSLMERVSKAMGEPSQLAQLRS
QLPTQLFLFDCLRADGRKIPIELRLVLVWDDDQRFEGVLGVGRDISQQRRAEKDLRMAAT
VFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGMLTVDEQQEGHLRYVVKQ
LHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFFTDISERKASEQRIHRL
AYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLK
DMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSLVRPFVLEN
REFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLEL
ESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLV
VDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEESGLPPACL
ELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFV
DGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPA
HQFEAQFSNETLFMFH
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaaccttactcatccgtcgtcattgcgtaccgcgcaacaagcgcccgccgttacc
ctgcgcgggtcgatcaagggtgcgctggcactgttggccctgattctgctgggcctgctg
ctgtggcaactattcgcccagttcaaccatacccaggccgacctgcgcaaacagagcctg
gacgccaccgcggaactggccgaccacctgagcctgaacatggcgttcaaggcgcagcag
gcagtgaatgtggtgcagccctatgtcaatgcaccgacacccgctgccctgccgagcctg
gtggacaccctgcgcgagcgcctgcctgccttgcaaagcgtggcctggctggacagtgcc
gggcaactgcgcgtcgacagcctggccggcagcccggaccgccagttgcttgacgaactg
ctgacactgaaccaggggcgcccgtacttcttcaccaattcggccgacaaccgcaccctg
tatctgttgctgcgccaggccgccgaacaggaccgtggctactggttgctgcgcctttca
ccggactactaccgcgagctcaccctctacctcgatggtggcggccacccgctgtggctg
ctggagaacagccgcagtggcgaggtgctgcagagccacgccccaaccgataccagcaac
gcgccgctgcaaagcgtgatgctggccttcatcgacaacagtacctggcagttgcgcggc
ctgttcgacgccgagctggcccagcaaaagttattgccggcgctgatcggcaaatgcctg
ctggtgctgttttgcgccctgctgccggtgctggcgctgatcaacatgcgccgccgccag
cgcgccctgcaggaagaccgccggcgctatcaggaaattttcgaaggcaccggcgtggcc
ctgtgcgtgctcgatttgtccagcctgcccagccagctcgaccgctaccacctgcgcaac
cgcgctgcgctcaagcacagcctggcgctggacccgaacctgcgtcgctcgctactgctg
gagctgaagatcaccgaggtcaaccaggtggcgcgccaactgctgaacatcgagtgccac
gaaggcgcatggcagcggctgatcgacggcaccggcgatggccgcgacagcgtcggcatg
cagctgatcgacgcactgatcgagcaacgccagctgcttgagctggaagtgcgcctgccg
gcaccgctgggcggcgagctgcacctgtggttgatggcgcgcctgccgcagcagcgccgc
gactaccaggcagtgatcctcagcatcagcgacatcaccagccgcaaacaggtcgagctg
tcgctgctggagcgcgaaggcttctggtcggacgtggtgcgcaccgtacccgaccagttg
tacgtgcaggatgtgctgagccagcggatgatcttcagcaaccgtcacctcggccagacc
ctgggctacgaccgtaccgagctggcacagatgggcgaccgcttctgggagctgctgctg
caccccgaggatgccgcgcactaccaggccctgcgccagcaacagcgcgacagcggccat
gaccaaccgctgcaatgccagttgcgcttccgccaccgcgacggcggctggcgctgctac
gacattcgcgagcaggtgctgacccgcgatgccgaaggcctggtgacgcgcatcatcggc
gtgggcaaggatgtgaccgtgcagatcgaggccagccagtcgctacgcgacagcgagcag
cgctaccgcatgctcgccgaaagcatcagcgacgtgatcttctccaccgacagcctgctc
aagctcaactatgtaagcccctcggtgcagagcgtgctgggctaccaggccgactggatt
ttcgccaacggctggcagtcgatcatcgccaacccggcccagctcaccggcatctacagc
ctgatggagcgcgtcagcaaagccatgggggagccatcgcaactggcgcaactgcgcagc
cagctaccgacccagctgttcctgttcgactgtctgcgtgccgatggccgcaagatcccc
atcgagctgcgtctggtgctggtgtgggacgatgaccagcgctttgagggcgtgcttggg
gtgggccgcgacatcagccagcaacgccgtgccgaaaaagacctacgcatggccgcaacg
gtattcgaacactccacgtcggcgatcctcatcaccgacccggccggctacatcgtccag
gccaacgaggcgttcagccgcgtcagtgggtacgccgtcagtgaagtgctcgaccagttg
ccgggcatgctcaccgtcgacgaacagcaggagggccacctgcgctatgtggtcaagcaa
ctgcaccagcgcggcagttgggaaggcgaggtgtggctcaagcgccgtgacggcgaccac
tacccggcctgggtgggcatcacggcggtactggacgacgaaggcgacctggccagctac
gtgtgcttcttcaccgacatcagcgagcgcaaagccagcgaacagcgcatccaccgcctg
gcctactacgacgccctcacccacctgcccaaccgcacgctgttccaggaccgtttgtac
aacgccctgcaacaggccgagcggcagaaggcctgggtggtgctgatgttcctcgacctc
gaccgtttcaagccgatcaacgactccctcggccatgccgccggcgaccgcatgctcaag
gacatggccctgcgcctgctggcctgcgtggatgacgacgacaccgtggcacgcatgggc
ggcgacgagttcaccctgctgctgcaaccgcgccccacccgcgagatggccctgaaccgc
gccatccatgtggccgagaacattctcggcagcctggtgcggccgtttgtgctggaaaac
cgtgaattcttcgtcacggccagtatcggcatcgccctcagcccgcaggatggcagcgag
ctgagccagttgatgaaaaacgccgacaccgccatgtaccacgccaaggaacgcggcaag
aacaacttccagttctaccaggccgaaatgaacgccagcgcactggagcgcctggagctg
gaaagcgacttgcgccatgccatggagcagaacgagttcatcctgtactaccagccgcag
ttcagcggcgacggcaagcgcctgacgggcgccgaggccctgctgcgctggcgccaccca
acccgtggtctggtgccaccgggcgactttatcccggtgatcgaagaactgggcctggtg
gtggacgtgggtgactgggtgctgcgcgaggccagccgccagctcaaggcctggcacaag
gccaaggtgcgggtacccaaggtgtcggtgaacatatcggcgcggcagttctcggacggg
caactgggcacgcggattgccaatatcctcgaagaaagcggcctgccaccggcatgcctg
gagctggagctgaccgaaagtatcctgatgcgcgaagtgaacgaggcgctgcagattctt
gccagcctgaaaaacctcggcctgagcattgcggtggacgacttcggcacgggttactcg
tcgctcaactacctcaagcagttccccatcgacgtactgaagatcgaccgcaccttcgtc
gacggcctgcccgaaggcgagcaggacgcgcagatcgcccgggcgatcatcgccatggcc
cacagcctcaacctggcggtaatcgccgagggcgtggaaacccacgaacagctggagttc
ctgcgcgagcatggctgcgacgaggtgcagggctacctgtttgggcggccgatgccggcg
catcagttcgaggcgcagttctccaacgagaccctgttcatgttccattga
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