Pseudomonas putida GB-1: PputGB1_0780
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Entry
PputGB1_0780 CDS
T00650
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppg03400
]
PputGB1_0780
Enzymes [BR:
ppg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PputGB1_0780
DNA repair and recombination proteins [BR:
ppg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PputGB1_0780
Prokaryotic type
PputGB1_0780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABY96690
UniProt:
B0KNF0
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All DBs
Position
complement(887948..889375)
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AA seq
475 aa
AA seq
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MHLTWLRSDLRIDDNTALSAATERGPTIALWLVSPGQWQAHDDAACKVDFWLRNLRALRQ
SLEGLNIPLLIRKIDTWDQAPQAVLDVCRQHQVQSVHWNEEYGINEQQRDDATRALLEKS
SIQACSHLDQLLFRPGTILTRSGDYFQVFSQFKKTCLEHLHRSLPALARRVERQAPLQIQ
SDPIPQHVDGFETPTRALREHWPAGEAEAQARLSRFLDETIDEYQQLRDLPAKHGTSQLS
TYLAAGVISPRQCLHGALASNRGEFDSGSTGVQTWINELLWREFYKHILNGYPQVSRHRA
FRAHTEALPWRDAPADLEAWKQGRTGFPIIDAAMRQLLHTGWMHNRLRMVVAMFLSKNLL
IDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQRFDPQGRFIR
HWLPELRDMDEKTIHEPMKSDDLFANNSYHRPMVILGSSRQRALEAFKGLPRRQD
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgacctggctgcgcagcgatctgcgcatcgatgacaacactgcactcagcgcc
gccaccgagcgcgggccgaccatcgccctgtggctggtcagcccagggcaatggcaagcc
catgacgacgccgcctgcaaggtcgacttctggctgcgcaacttgcgcgccctgcgccaa
tcgctcgaaggcctgaatatccccctgctgatccgcaagatcgacacctgggaccaggcc
ccccaggcggtgctcgatgtatgccgccaacaccaggtgcaaagcgtgcactggaacgaa
gagtacggcatcaacgaacagcaacgcgacgatgcgacccgcgcgctgctggagaagtcg
tccatccaggcctgcagccacctcgaccagctgttgttccgccctggcaccatccttacc
cgcagcggcgactacttccaggtcttcagccagttcaagaagacctgcctggaacacctg
caccgcagcctgcctgccctggcccgccgggtggagcgtcaggcaccgctgcaaatccaa
agtgacccgattccacaacacgtagacggttttgaaacccccacgcgcgccttgcgtgag
cattggccggcgggtgaggccgaagcgcaggcgcgcctgtcccgctttctggacgaaacc
atcgacgaataccaacaattgcgtgacctgcctgccaagcacggcaccagccaactctcc
acctacctggccgctggcgtgatctcgccgcgccaatgcctgcacggcgcactggccagc
aaccggggcgagttcgacagcggcagtacgggcgtgcagacctggatcaacgagctgctc
tggcgcgagttctacaagcacatcctgaacggttacccacaggtctcgcgccaccgcgcc
tttcgcgcccataccgaagccctgccctggcgtgacgccccggcggacctggaagcctgg
aaacagggccgcaccgggttcccgatcatcgatgcggccatgcgccaactgctgcacacc
ggatggatgcacaaccgcctgcgcatggtcgtggccatgttcctcagcaagaacctgctg
atcgactggcgcaagggcgagcgacacttcatgcgccacctgatagacggcgacctggcc
gccaacaacggcggctggcagtggagcgcgtccaccggcaccgacgctgtgccttatttc
cgcattttcaacccagtttctcagtctcagcgtttcgacccacaggggcgcttcatccgg
cactggctgcccgaattacgcgacatggatgagaaaactatccatgagccgatgaaatct
gatgatctttttgctaataattcgtatcaccgtccaatggtcattctcggcagcagtcgc
cagcgtgcactggaagccttcaaaggcctaccacgtcggcaggattag
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